Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00138 ATGGGTTATCTCAATTCAGCTTTGTCCTCTTCAAGTCAGGTTCATTATGCCGATGATGCACCTGTCACCGGTGGGGGTCTCAGTCACAACGGAAAATTCAGTTATGGATATGCTAGCTCTCCTGGCAAGAGATCTTCGATGGAAGATTTTTATGAGACAAGAATAGATGGTGTTGATGGTGAAATCGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGTGTTCGTGCTGCTGAGTATGTCAAGCAAAACCTGTTTAGTAATTTGATCAGTCACCCCAAATTCATTTCCGACACCAAATCAGCAATAGCTGATGCATATAACCATACCGACTCTGAATTTCTGAAATCAGAAAATAGTCATAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTAGTTGGTGATCGTCTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGACAGCTCTCTTGAGTTTCTTATTTTGGCCAGTGACGGGCTATGGGATGTTGTCACAAATGAGGAAGCCGTTACTATGATTAAACCAATTGAGGATGCAGAGGAGGCAGCAAAGAGGCTGTTGCAAGAAGCATATCAGAGAGGTAGTGCTGACAATATCACTTGTGTTGTTGTTCGTTTCTTGATGAACCAAGGCGCTTCTTCTCATAGTAGCTCAGGGTAA 882 0.4399 MGYLNSALSSSSQVHYADDAPVTGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVTNEEAVTMIKPIEDAEEAAKRLLQEAYQRGSADNITCVVVRFLMNQGASSHSSSG 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00138 293 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Gabi3450g00138 293 CDD PP2Cc 33 280 IPR001932 -
Gabi3450g00138 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Gabi3450g00138 293 SMART PP2C_SIG_2 29 280 IPR001932 -
Gabi3450g00138 293 FunFam probable protein phosphatase 2C 59 26 284 - -
Gabi3450g00138 293 Gene3D - 26 285 IPR036457 -
Gabi3450g00138 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Gabi3450g00138 293 PANTHER PROTEIN PHOSPHATASE 26 279 IPR015655 GO:0004722|GO:0006470
Gabi3450g00138 293 SMART PP2C_4 24 278 IPR001932 -
Gabi3450g00138 293 Pfam Protein phosphatase 2C 63 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00138 Gabi-Chr3450 1116884 1121089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00138 1 292 PP2C-type Phosphatase Gene Family AT4G31750 90.068 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00138 K17506 - gmx:547661 552.747