Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00106 ATGATGCACATGACATTCTATTGGAGCAGGAAGGTCACTCTTCTTATCGATTCTTGGAAGACCGATTCATGGATCGATTACGTTCTCAGTTTGGTTGCGTGTCTTGTCGTTTCCGTTTTCTATCAGTATCTCGAGAATCGCCGGATTCGCCTCAAGGTGTTCGCCGCCGGGAAGTCCTTTCCGCCGGAGATACAGACACCTCTTCTGAGACGGAGGATCGCCGGAGATAGGGCTAAGTTGGGTGTGAAGCTTGCCGGAGCGGTTCTGTTTGGTGTTAGCTCGGCGATCGGGTATTTGTTGATGTTGGCGGTTATGTCCTTCAACGGAGGTGTCTTTGTGGCCATCGTGGTGGGTCTTGCCATTGGTCACTTCTTCTTCAGGAGCGACGGCGAAGATGCTTATGATGCCATCGTCGTTGACAATTCTTGTGCCTGTGCTTGA 441 0.5102 MMHMTFYWSRKVTLLIDSWKTDSWIDYVLSLVACLVVSVFYQYLENRRIRLKVFAAGKSFPPEIQTPLLRRRIAGDRAKLGVKLAGAVLFGVSSAIGYLLMLAVMSFNGGVFVAIVVGLAIGHFFFRSDGEDAYDAIVVDNSCACA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00106 146 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 132 IPR007274 GO:0005375|GO:0016020|GO:0035434
Gabi3450g00106 146 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00106 Gabi-Chr3450 790050 790865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00106 1 146 Inorganic Solute Cotransporters AT5G20650 53.947 1.02e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00106 K14686 - gmx:100805457 223.787