Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00093 ATGAATCTGCGCAACGGCGCTAAGGTTTGGGTCCCTGACAGAGATTTGGCTTGGGTGCCTGCTGAAGTACTCGAATATGCTGGAAAGCAAGTTCGCCTTTCAACGGCTTCTGGCAAGACGGTTCTTGCTCTTCCGGAGAAACTGCTTCCTAGGGATGCGGATGAAGATGAGCATGGAGGAGTCGAAGATATGACGAGGTTGGCTTGCTTGAATGAGCCGGGGGTGTTGTACAATCTTCGGAGGAGATACGCACTGAATGATATTTATACATATACAGGAAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATTTGTATGATATCCATATGATGGAGCAGTACAAGGGAGCTGTGTTTGGTGAGCTTAGTCCACATGTATTTGCCGTTGCTGATGCATCTTATAGAGCAATGATGAATGAAGGTCAAAGCCAATCTATCCTGGTCAGCGGTGAAAGTGGTGCTGGTAAAACTGAGACGACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGGCGTGCTGCTGGCGATGATAGAACAGTTGAACAACAAGTTCTTGAATCGAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACTGTCAGGAATGACAATTCAAGCCGTTTTGGGAAGTTTGTTGAAATCCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGGACTTACTTACTGGAAAGATCACGAGTTGTGCAGATAACGGATCCAGAAAGAAACTATCACTGCTTTTATCAATTGTGTGCATCTGAACGGGATGTAGAGAAGTATAAGTTAGGACATCCAAGCCACTTCCACTATTTAAATCAAAGTAAAGTCTATGAATTAGATGGGGTTAGCAGTGCTGAAGAATACATGAAGACGAGGAGAGCAATGGATATTGTTGGCATAAGTCTCGAGGATCAGGATGCCATATTTAGTACCTTAGCTGCAATCCTACATTTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCATGATTCGTCAGTAATAAAGGATGAGAAATCAAGATTTCATTTGCAGATGGCTGCTAATCTTTTCAGGTGTGATTTGAACCTACTGCTAGCAACTTTATGCACCCGTTCAATACAAACCCGAGAAGGAAATATTGTCAAAACTCTTGATTGTAATGCTGCTGTTGCTGGCCGGGATGCTCTGGCAAAAACGGTTTATGCTCATTTATTTGATTGGCTTGTTGATAAGATCAATAGTTCTGTTGGGCAAGATATCAATTCCCAGATGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGCTTTAAGGATAATAGTTTTGAGCAATTCTGTATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAATATAGCAAAGAAGAGATTAACTGGAGTTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATCATTGCTCTGTTAGATGAAGCTTGCATGTTTCCAAAATCTACACATGAAACATTCTCAACCAGGTTGTTTCAGCATTTCCGGTCCCACCCTAGGTTAAAAAAGGAAAAGTTTTCAGAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACTTACCATACAGACACCTTCTTAGATAAAAATCGTGATTATGTAGTTGTAGAACATTGTAATCTATTATCTTCTTCAAAGTACCCATTTGTGTCGGGTCTTTTTCCTATGCTACCAGAGGAATCTTCAAGGTCATCGTACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTCATGGAAACGCTTAACAAAACAGAGCCTCATTACATTCGATGTATCAAGCCAAACTCTTTGAATCGACCCCAACAGTTTGAGAATACCAGCGTCATACACCAGTTACGCTGTGGGGGTGTCCTCGAGGCTGTACGGATAAGTCTGGCTGGTTACCCCACTCGAAGGAGTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCTGAATTTATGGATGGAAGTTGTGATGATAAAGCTGCAACTCAGAAAATTTTGCAAAGGCTAAAGCTTGAAAATTTTCAGTTGGGTAGGTCTAAAGTGTTTCTCAGGGCTGGTCAAATTGGCATTTTAGACTATAAACGTGCTGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGCCGACTGCAAACATTTATTGCACGCAATAATTTCATCTCAATCCGAGCTGCTGCATTTTCTCTTCAAGCATGCTGCCGGGGATGCCTTGTCCGGAAGATATATGCTTCTAAACGGGAGATAGCAGCAGCTCTCTTCATTCAGAAATATATTCGAATGTTTCTAATGAGGCATGCTTACTTGAAACTATATGCTTCTGCTATTATCTTACAATCCAAAGTTCGTGGATTTACAACTCGCCAAAGATTCTTGCATAGAAAAGAAAACAAAGCTGCTTCTTTAATTCAGGCCTATTGGAGGATGTGCAAGGCACGGGCTGCCTTCCGACAACATCAAGGTTCAATTGTGGCAATACAATGCCTTTGGCGGTGTAGACAAGCAAAAAGAGAACTTCGCAGACTAAAACAAGAGGCTAACGAAGCCGGTGCCCTGCGTTTAGCTAAGAATAAACTTGAGAAGCAATTGGAAGAGCTCACATGGCGTTTGCATCTTGAAAAAAAAATAAGGGTGTCTAATGAAGAGGCCAAGCAAGTTGAGATTTCGAAACTTCAGAAGATATTAGAAGCTCTGAATCTTGAATTAGATGCAGCTAAATTGGCTACAATTAATGAGTGCAACAAGAATGCAGTTTTGCAAAATCAGTTGCAATTGTCAGTAAAGGAAAAATCTGCTTTAGAAAGAGAGCTAGTTGCAATGGATGAAGTGCGGAAGGAAAATGCTCTATTAAAGGGTTCTTTGGATGCCTTTGAAAAGAAGAGCAGAGCTTTGGAGCTTGAGCTTGTGAATGCTAGAAAAGACCATGATGATACCATAAAGAAAATGAGGGAGTTTGAACAGAAGTGCTCTCAACTTGTGCAAAATGTGAAAAGTCTTGAGGAAAAGCTATTGAGTTTAGAGGATGAAAATCATGTGCTTAGTCAGAAAGCATTAAGTGTATCTCCTAAGATTACTTTACTTTTATTTTTGGAACAGAAATATTCAAGTGCAATAGCCCCCCGCACTGAACGAAAGCCCATATTTGAGTCACCCACACCCACAAAACTTATTGCCCCTTCAACACTTGGCTTGTCAGACTCTCGTCGATCTAAATTAACTGCAGAGAGGCACCAGGATAACTATGAATTCCTCTCTAGGTGTATCAAAGAGGATTTGGGGTTCAAAAATGGTAAGCCTCTGGCTGCTTGTATCATATACAAATGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGCACAGCCATATTTGATTACATAATTGATGGAATTAATGATGTCCTAAAGGTTAGTGATGATGACATTGTCTTGCCATATTGGCTGTCCAATACCTCTGCACTTCTATGCCTCTTACAAAGGAACTTGCGTTCAAATGGCTTTTTACTTGCCACTGCTCAACGTTATGCTGGATCATCTGGCTTGGGACTGAAGTCTCCATTGAAGTTTATTGGATATGAAGATGGTATTTCCCATGTGGAGGCTAGATATCCAGCTATACTTTTTAAACAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGCCTTATACGTGATAACTTGAAAAAGGAGCTTTCTCCACTTCTGGGATTATGTATTCAGGCACCCAAAACAGGACGAGTGCAAGGTGGGAAATCATCTAGATCCCCTGGTAGTAGGCTTCCTCAACAATCACCTGGTGGTCAATGGGACAACATCATCAAATTTTTGGATTCACTCATGAGCCGGTTATGTGCAAATCATGTACCATCCTTCTTTATCCGCAAGCTAGTTACTCAGGTTTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTGTTGCGGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTGAAGTCTGGTCTCGCAGAACTGGAGAAATGGATAGCTAATGCAAATGAGCAGCATGCAGGAACGTCCTGGCACGAGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGGAAGAAATCTTTGGAAGAAATCCGGCAGGATCTTTGTCCGGCATTAACTGTGAGGCAAATCTATCGTATCAGTACTATGTACTGGGACGACAAGTATGGAACCCAGAGTGTGTCCAATGAGGTAGTTAGTGAAATGAGGGAAATTGTGAGCAAGGACAATCAGAATTTGACCTCAAATTCGTTCTTGTTAGATGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATAAGGCAATCTCTGCTATAGATACAGATGATATTGATCTCCCAGCATTTTTGTGTGAATATCCTTGTGCCCAGTTTCTTATTTTACATGAGAAGTAA 4527 0.4045 MNLRNGAKVWVPDRDLAWVPAEVLEYAGKQVRLSTASGKTVLALPEKLLPRDADEDEHGGVEDMTRLACLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGAVFGELSPHVFAVADASYRAMMNEGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDVEKYKLGHPSHFHYLNQSKVYELDGVSSAEEYMKTRRAMDIVGISLEDQDAIFSTLAAILHLGNIEFSPGKEHDSSVIKDEKSRFHLQMAANLFRCDLNLLLATLCTRSIQTREGNIVKTLDCNAAVAGRDALAKTVYAHLFDWLVDKINSSVGQDINSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTRLFQHFRSHPRLKKEKFSETDFTVSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKYPFVSGLFPMLPEESSRSSYKFSSVASRFKQQLQALMETLNKTEPHYIRCIKPNSLNRPQQFENTSVIHQLRCGGVLEAVRISLAGYPTRRSYSEFVDRFGLIAPEFMDGSCDDKAATQKILQRLKLENFQLGRSKVFLRAGQIGILDYKRAEVLDNAAKCIQRRLQTFIARNNFISIRAAAFSLQACCRGCLVRKIYASKREIAAALFIQKYIRMFLMRHAYLKLYASAIILQSKVRGFTTRQRFLHRKENKAASLIQAYWRMCKARAAFRQHQGSIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEEAKQVEISKLQKILEALNLELDAAKLATINECNKNAVLQNQLQLSVKEKSALERELVAMDEVRKENALLKGSLDAFEKKSRALELELVNARKDHDDTIKKMREFEQKCSQLVQNVKSLEEKLLSLEDENHVLSQKALSVSPKITLLLFLEQKYSSAIAPRTERKPIFESPTPTKLIAPSTLGLSDSRRSKLTAERHQDNYEFLSRCIKEDLGFKNGKPLAACIIYKCLLHWHAFESERTAIFDYIIDGINDVLKVSDDDIVLPYWLSNTSALLCLLQRNLRSNGFLLATAQRYAGSSGLGLKSPLKFIGYEDGISHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGLCIQAPKTGRVQGGKSSRSPGSRLPQQSPGGQWDNIIKFLDSLMSRLCANHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANANEQHAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDMSIPFSAEDIDKAISAIDTDDIDLPAFLCEYPCAQFLILHEK 1508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00093 1508 Gene3D - 830 879 - -
Gabi3450g00093 1508 Gene3D - 777 829 - -
Gabi3450g00093 1508 Pfam DIL domain 1327 1430 IPR002710 -
Gabi3450g00093 1508 Gene3D - 663 775 - -
Gabi3450g00093 1508 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi3450g00093 1508 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi3450g00093 1508 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi3450g00093 1508 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi3450g00093 1508 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi3450g00093 1508 ProSiteProfiles Dilute domain profile. 1156 1451 IPR002710 -
Gabi3450g00093 1508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 780 878 IPR027417 -
Gabi3450g00093 1508 Gene3D - 435 620 - -
Gabi3450g00093 1508 FunFam Myosin heavy chain 249 303 - -
Gabi3450g00093 1508 Gene3D Kinesin motor domain 62 659 IPR036961 -
Gabi3450g00093 1508 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gabi3450g00093 1508 ProSiteProfiles IQ motif profile. 828 857 IPR000048 GO:0005515
Gabi3450g00093 1508 Coils Coil 948 968 - -
Gabi3450g00093 1508 SMART iq_5 827 849 IPR000048 GO:0005515
Gabi3450g00093 1508 SMART iq_5 850 872 IPR000048 GO:0005515
Gabi3450g00093 1508 SMART iq_5 731 753 IPR000048 GO:0005515
Gabi3450g00093 1508 SMART iq_5 779 801 IPR000048 GO:0005515
Gabi3450g00093 1508 SMART iq_5 754 776 IPR000048 GO:0005515
Gabi3450g00093 1508 SMART iq_5 802 824 IPR000048 GO:0005515
Gabi3450g00093 1508 SMART MYSc_2a 53 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi3450g00093 1508 ProSiteProfiles IQ motif profile. 851 880 IPR000048 GO:0005515
Gabi3450g00093 1508 Coils Coil 913 940 - -
Gabi3450g00093 1508 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Gabi3450g00093 1508 Coils Coil 864 908 - -
Gabi3450g00093 1508 PANTHER MYOSIN 51 1440 - -
Gabi3450g00093 1508 MobiDBLite consensus disorder prediction 1276 1297 - -
Gabi3450g00093 1508 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi3450g00093 1508 MobiDBLite consensus disorder prediction 1277 1297 - -
Gabi3450g00093 1508 Pfam Myosin head (motor domain) 61 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi3450g00093 1508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 778 IPR027417 -
Gabi3450g00093 1508 Gene3D - 249 306 - -
Gabi3450g00093 1508 ProSiteProfiles IQ motif profile. 755 784 IPR000048 GO:0005515
Gabi3450g00093 1508 Pfam IQ calmodulin-binding motif 830 849 IPR000048 GO:0005515
Gabi3450g00093 1508 Pfam IQ calmodulin-binding motif 782 800 IPR000048 GO:0005515
Gabi3450g00093 1508 Pfam IQ calmodulin-binding motif 756 775 IPR000048 GO:0005515
Gabi3450g00093 1508 Pfam IQ calmodulin-binding motif 805 823 IPR000048 GO:0005515
Gabi3450g00093 1508 CDD MyosinXI_CBD 1107 1474 IPR037975 GO:0007015
Gabi3450g00093 1508 ProSiteProfiles IQ motif profile. 803 832 IPR000048 GO:0005515
Gabi3450g00093 1508 SMART DIL_2 1326 1433 IPR002710 -
Gabi3450g00093 1508 Coils Coil 972 1048 - -
Gabi3450g00093 1508 CDD MYSc_Myo11 73 717 IPR036018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00093 Gabi-Chr3450 718064 750680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00093 1 1504 Myosins gene family AT4G33200 74.086 0.0 2292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00093 K10357 - gmx:100796413 2660.17