Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00069 ATGAGTTTGAGTGCAGCCGAGGATGATTCGGCTTCAGAAATTCACATCCCAGCAGAGATTGATTGGCACATGCTTGACAAGTCAAGGTTTTTCTTCCTCGGCGCCGCCTTATTCTCCGGTGTTTCAGCTGCGCTTTATCCTATGGTCGTGTTGAAGACCCGCCAACAGGTTTCTTCCACACACTACTCTTGCCTCAACATGTCTTGTGCCATTATGCGCTACGAAGGTTTCAGAGGTTTTTACAAAGGTTTTGGTACTTCTTTGATGGGAACCATCCCTGCTCGTGCACTTTACATGGCTGCCCTTGAAATCACCAAGAGTAATGTTGGCACCGCTTTTCTTGATTTGGGTTTCTCAGACACCACAGCCACTGCCATAGCTAGTGCCACGGCAGGGGTCACTTCTGCTATGGCTGCACAGTTAGTTTGGACACCAATTGATGTTGTGAGCCAAAGACTTATGGTTCAAGGCACCGGTGGAAGCAAAACTATACTAGCTAATCTTAATTCTGAGAATTACAGGAATGGCCTTGATGCGTTCAGGAAAATTCTGTGTTCGGATGGACCAAGAGGGTTCTATAGGGGATTTGGGGTTTCCATTTTGACTTATGCGCCATCCAATGCGGTTTGGTGGACTTCATATTCAATGGTCCATAGGCTCATTTGGGGTGCTTTTGGTTGTTATATGGGGAAAAGGGATGAGAGTGGTTTGGGTAATGGGTGTGGTTTTAGACCTGATTCCAAGGCAATGGTAGCTGTTCAAGGATTGAGTGCTATTATGGCCAGTGGGGTCTCAGCAATTGTAACGATGCCACTTGACACAATCAAGACAAGGTTGCAGGTGTTGGATGCAGAGGAGAATGGACGAAAGATGCCGTTAACTTTTTTGCAGACGGTTCGGAATTTGGTGAAGGAAGGTGGCATCCCTGCTTGTTACAGAGGATTGGGGCCAAGGTGGGCTTCAATGTCCGTGTCTGCAACTACCATGATTACTACCTATGAGTTTCTTAAACGCATGTCTACAAAGAGTCAATAG 1035 0.4657 MSLSAAEDDSASEIHIPAEIDWHMLDKSRFFFLGAALFSGVSAALYPMVVLKTRQQVSSTHYSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMAALEITKSNVGTAFLDLGFSDTTATAIASATAGVTSAMAAQLVWTPIDVVSQRLMVQGTGGSKTILANLNSENYRNGLDAFRKILCSDGPRGFYRGFGVSILTYAPSNAVWWTSYSMVHRLIWGAFGCYMGKRDESGLGNGCGFRPDSKAMVAVQGLSAIMASGVSAIVTMPLDTIKTRLQVLDAEENGRKMPLTFLQTVRNLVKEGGIPACYRGLGPRWASMSVSATTMITTYEFLKRMSTKSQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00069 344 Pfam Mitochondrial carrier protein 252 343 IPR018108 -
Gabi3450g00069 344 Pfam Mitochondrial carrier protein 124 222 IPR018108 -
Gabi3450g00069 344 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Gabi3450g00069 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 343 - -
Gabi3450g00069 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Gabi3450g00069 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
Gabi3450g00069 344 Gene3D Mitochondrial carrier domain 28 344 IPR023395 -
Gabi3450g00069 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Gabi3450g00069 344 SUPERFAMILY Mitochondrial carrier 24 336 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00069 Gabi-Chr3450 534307 535992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00069 1 344 Chloroplast and Mitochondria Gene Families AT1G72820 64.841 1.63e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00069 K15121 - gmx:100784202 580.096