Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00066 ATGTGTACCACGATCCTTTCTTTTCATATCGATGGTACCAAAATGACAGATAAAAATCCAAGACCAGCATCTTCACCTGACAGTGATTTCACCAACCAGTGGCCTGATCTGGAGCTCTCTGAGTACTTGAAGTTCGATGATGATCAATGGGCAGATGATGGTCCAGAGTCATTTGTTTCTGAGCATGTCCTGAACCAGGATAATCAAGCCAATGAAGCAGGTGAATTTGGAGGAAGTAGCAGCCATTTTGAGGAGTCTTCTAGCAGAGACATTAGCAGTGAACCTGAGAAGAAGGAAGTTAAAGATAAAGTGGCATTCAGAACAAAGTCAGAGGTTGAAATACTGGACGATGGGTTCAAGTGGAGGAAGTACGGAAAGAAGATGGTGAAAAACAGCCCCAATCCAAGGAACTACTACAGGTGTTCAGTGGATGGATGCCCTGTTAAAAAAAGAGTTGAGAGAGATAGGGATGATCCAAGGTATGTAATAACAACCTACGAAGGCAACCATACTCACCCAAGTCCATGCTAA 531 0.4331 MCTTILSFHIDGTKMTDKNPRPASSPDSDFTNQWPDLELSEYLKFDDDQWADDGPESFVSEHVLNQDNQANEAGEFGGSSSHFEESSSRDISSEPEKKEVKDKVAFRTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYRCSVDGCPVKKRVERDRDDPRYVITTYEGNHTHPSPC 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00066 176 MobiDBLite consensus disorder prediction 87 102 - -
Gabi3450g00066 176 FunFam WRKY transcription factor 57 101 175 - -
Gabi3450g00066 176 SUPERFAMILY WRKY DNA-binding domain 107 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3450g00066 176 MobiDBLite consensus disorder prediction 48 102 - -
Gabi3450g00066 176 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 175 IPR044810 GO:0003700
Gabi3450g00066 176 MobiDBLite consensus disorder prediction 61 86 - -
Gabi3450g00066 176 MobiDBLite consensus disorder prediction 9 33 - -
Gabi3450g00066 176 Gene3D WRKY domain 99 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3450g00066 176 SMART WRKY_cls 115 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3450g00066 176 ProSiteProfiles WRKY domain profile. 110 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3450g00066 176 MobiDBLite consensus disorder prediction 18 33 - -
Gabi3450g00066 176 Pfam WRKY DNA -binding domain 116 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00066 Gabi-Chr3450 509414 510859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00066 16 174 WRKY Transcription Factor Family AT5G26170 51.977 5.76e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3450g00066 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00066 - - gmx:100808823 259.61