Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00047 ATGGGTGCCTCAGGAAAATGGGTAAAAGCATTAATAGGACTCAAGAAGCCCGAAAAGCATGCTGAACATGCGAAGGAGGGGGGTAAGAGCAAGAAGTGGAAGTTATGGAGGAGTTCATCGGGTTCAGGGGATATGAGTTCGTGGAAGGGTTTCAAAGGAAACCACAAAGCAGCTTCTGAGGGTTCTGATTCTCCACCAGTAGTGGCAGATGCTTATACCGCAGCAGTGGCAACTGTGGTTCGAGCTCCACCTAAGGATTTTAGACTAGTCAGGCAAGAATGGGCAGCAATTAGAATCCAAACTGCTTTCCGCGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGGAGTGGTGAGGCTTCAAGCTCTTGTGAGGGGTAGACAGGTGAGGAAGCAGGCTGCGGTGACATTAAGGTGCATGCAGGCCTTGGTTCGTGTTCAAGCTCGAGTAAGAGCTCGTCGTGTGAGGATGTCCATAGAAGGGCAAGCTGTGCAGAACATGCTTAATGAGAGACGCACCAAGCTTGATCTTTTGAAGGAAGCTGAGGAAGGGTGGTGTGATAGCAGAGGAACATTGGAAGATGTTAAAGCAAAAATACAAACGAGGCAAGAAGGAGCTTTCAAGAGAGAGAGAGCAATTGCATACTCTCTTGCTCAGAAGCAATGGAGATCAACCCCAAGCTCTAATTCACGAATAAATCACGAGGTTGACAAAGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCTAAACCCTGGGAGAGTAGATTGATGGAACAATCTCAGGCTGAAGGCTTAGATAAAACACCACCTCCAAAGAAATTTGGGGAAACCATTGTAAGCTCTAATTCAAAACCTTGCTTGATCAAAATCAAGAAAAACAACGTCACAACAAGGGTTTCTGCTAAGCCTCCACATATTGGGCAAGCTACTCGCTCATCCTCAAGTCCTAGTTCTGAATTCCGGTATGATGAGAGTTCTGCATCATCTTCTATTTGTACATCTACAACACCAATGTCTGGGAATACTTGGGACAGGACCGAGGATGGTAGTAACACTAGACCGAATTACATGAACCTGACTCAGTCAACTAAGGCAAAGCAAAAAACAAGTAATCAACAAATGTACAACAGAGCTCAAAGGCAACAGTCCATGGATGAGTTTCAATTTCTCAAAAGGGCTGCGGTTTTCTCTAATGGGGATTCCAAAAGCACTGCTGGTTCTGATCCTTCAATCAACTTTTCTAGACCACTTCACCCACCAACTCACTTGGACAAGAGCTCATTGAGACCAAGATGA 1308 0.4595 MGASGKWVKALIGLKKPEKHAEHAKEGGKSKKWKLWRSSSGSGDMSSWKGFKGNHKAASEGSDSPPVVADAYTAAVATVVRAPPKDFRLVRQEWAAIRIQTAFRAFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRTKLDLLKEAEEGWCDSRGTLEDVKAKIQTRQEGAFKRERAIAYSLAQKQWRSTPSSNSRINHEVDKANWGWSWLERWMAAKPWESRLMEQSQAEGLDKTPPPKKFGETIVSSNSKPCLIKIKKNNVTTRVSAKPPHIGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTWDRTEDGSNTRPNYMNLTQSTKAKQKTSNQQMYNRAQRQQSMDEFQFLKRAAVFSNGDSKSTAGSDPSINFSRPLHPPTHLDKSSLRPR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00047 435 PANTHER IQ-DOMAIN 5-RELATED 1 397 - -
Gabi3450g00047 435 MobiDBLite consensus disorder prediction 402 435 - -
Gabi3450g00047 435 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Gabi3450g00047 435 MobiDBLite consensus disorder prediction 18 64 - -
Gabi3450g00047 435 MobiDBLite consensus disorder prediction 263 283 - -
Gabi3450g00047 435 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Gabi3450g00047 435 MobiDBLite consensus disorder prediction 299 387 - -
Gabi3450g00047 435 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00047 Gabi-Chr3450 358490 360692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00047 1 429 IQD Protein Family AT2G26180 61.538 9.06e-152 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00047 - - gmx:100799714 619.387