Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00046 ATGGGAAGACAGCCACTAATAATTATAGCAGATGCAGAGCTTTGTAAAGAGGTCTCCATAAAAAAATTTAAAGATATTCCAAACCGAAGTATTCCCTCTCCTATTTCTGCTTCCCCTCTTCACCAAAAAGGCCTCTTCTTCACCCGGGATTCACAATGGTCCACCATGAGAAATACAATATTGTCGGTGTACCAGCCATCACACTTATCCGGATTAGTGCCTACAATGCAGTCATTCATAGAATCTGCGACCCAAAATCTTGACTCTCAAAAAGAAGACATTATCTTCTCTGATATATCTCTCAGACTGGCAACTGATGTGATTGGAGAGGCAGCCTTTGGTGTCAACTTTGGCCTCTCTAAGCCTCATTCAGTTAGTGATTCAATCAATAGTGTTAACAACAGTAACAACAAAGTAGGTGATGCAGGTGCTAGTAATGAAGTATCAGATTTCATCAATCAACACATTTACTCAACAACCCAACTTAAGATGGACTTATCTGGTTCCTTCTCCATCATAGTGGGTCTACTTGTTCCAATACTTCAGGAGCCATTTAGGCAGATTTTGAAGAGAATACCAGGCACCATGGACTGGAAAATTGAGCGTACTAATCAGAAACTAAGTGGCCGTCTTGATGAGATTGTGGAAAATAGAATGAAAGAGAGGAACCGAACTTCAAAGGATTTCTTGTCACTCATACTAAATGCCAAAGAATCAAAAGCCTTATCAGAAAAAGTCTTCACCCCTGATTGCATTAGTGCTGTTACTTATGAGCATCTACTTGCTGGGTCAGCAACCACGGCCTTCACTTTGTCTTCCATTGTCTATTTGGTTGCTGGACATCCAGAAGTTGAGAAAAAGCTACTTGAAGAGATTGATGGGTTTGGTCCTGTAGATCATACACCCACTTCTCAAGATCTTCATGACAAGTTTCCTTATCTTGATCAGTTGATTAAAGAGGGGATGAGGTTTTACACTGTCTCCCCATTAGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGATACCTTCTCCCAAAGGGGACTTGGGTCTGGTTAGCCCTTGGAGTTCTAGCAAAAGATCCAAGAAACTTTCCAGAACCAGAAAAGTTCAAACCAGAGAGGTTTGACCCCAACTGTGAAGAAATGAAACGAAGGCATCCTTATGCTTACATACCGTTTGGAATTGGTCCTCGGGCTTGCATTGGTCAGAAATTTACCCTACAAGAGATAAAGCTTTCTCTGATTCATTTATACCGGAGATACTTGTTTCGGCATTCACCTAATATGGAGAATCCCGTAGAACTCGATTATGGCATAGTCCTCAACTTCAAGCATGGTGTCAAGCTCAGAGCCATAGCAAGAACAGAGAGGAGTTGCTAA 1386 0.4134 MGRQPLIIIADAELCKEVSIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLSGLVPTMQSFIESATQNLDSQKEDIIFSDISLRLATDVIGEAAFGVNFGLSKPHSVSDSINSVNNSNNKVGDAGASNEVSDFINQHIYSTTQLKMDLSGSFSIIVGLLVPILQEPFRQILKRIPGTMDWKIERTNQKLSGRLDEIVENRMKERNRTSKDFLSLILNAKESKALSEKVFTPDCISAVTYEHLLAGSATTAFTLSSIVYLVAGHPEVEKKLLEEIDGFGPVDHTPTSQDLHDKFPYLDQLIKEGMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEKFKPERFDPNCEEMKRRHPYAYIPFGIGPRACIGQKFTLQEIKLSLIHLYRRYLFRHSPNMENPVELDYGIVLNFKHGVKLRAIARTERSC 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00046 461 Gene3D Cytochrome P450 1 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 PANTHER THROMBOXANE-A SYNTHASE 1 458 - -
Gabi3450g00046 461 PRINTS E-class P450 group I signature 271 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 PRINTS E-class P450 group I signature 103 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 PRINTS E-class P450 group I signature 315 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 PRINTS E-class P450 group I signature 402 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 PRINTS E-class P450 group I signature 355 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 PRINTS E-class P450 group I signature 392 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 SUPERFAMILY Cytochrome P450 1 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 Pfam Cytochrome P450 1 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 395 404 IPR017972 GO:0005506|GO:0016705
Gabi3450g00046 461 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 PRINTS P450 superfamily signature 393 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00046 461 PRINTS P450 superfamily signature 262 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00046 Gabi-Chr3450 352333 358317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00046 1 456 Cytochrome P450 AT2G26170 72.588 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00046 K20771 - gmx:100797803 800.431