Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00045 ATGGTGTTGATGGATTTGGAATGGCCGTTTCCAATTCCAAGTGTCCCTTATGCTTCAACAATAATGTTCACCCTGGTGGCGTTAATAGGGGGATTGTTTGTTTATCTGTATGGGCCGTATTGGGGTGTAAGGAAGGTTCCAGGCCCAAAATCTCTGCCGCTGGTAGGACACCTTCCCTTGCTGGCTAAGTATGGTCCTGATGTGTTCTCAGTCCTTGCAAAGCAATATGGTCCAATCTACAGATTTCATATGGGAAGACAGCCACTAATAATTATAGCAGATGCAGAGCTTTGTAAAGAGGTCTCCATAAAAAAATTTAAAGATATTCCAAACCGAAGTATTCCCTCTCCTATTTCTGCTTCCCCTCTTCACCAAAAAGGCCTCTTCTTCACCCGGGATTCACAATGGTCCACCATGAGAAATACAATATTGTCGGTGTACCAGCCATCACACTTATCCGGATTAGTGCCTACAATGCAGTCATTCATAGAATCTGCGACCCAAAATCTTGACTCTCAAAAAGAAGACATTATCTTCTCTGATATATCTCTCAGACTGGCAACTGATGTGATTGGAGAGGCAGCCTTTGGTGTCAACTTTGGCCTCTCTAAGCCTCATTCAGTTAGTGATGCAGGTGCTAGTAATGAAGTATCAGATTTCATCAATCAACACATTTACTCAACAACCCAACTTAAGATGGACTTATCTGGTTCCTTCTCCATCATAGTGGGTCTACTTGTTCCAATACTTCAGGAGCCATTTAGGCAGATTTTGAAGAGAATACCAGGCACCATGGACTGGAAAATTGAGCGTACTAATCAGAAACTAAGTGGCCGTCTTGATGAGATTGTGGAAAATAGAATGAAAGAGAGGAACCGAACTTCAAAGGATTTCTTGTCACTCATACTAAATGCCAAAGAATCAAAAGCCTTATCAGAAAAAGTCTTCACCCCTGATTGCATTAGTGCTGTTACTTATGAGCATCTACTTGCTGGGTCAGCAACCACGGCCTTCACTTTGTCTTCCATTGTCTATTTGGTTGCTGGACATCCAGAAGTTGAGAAAAAGCTACTTGAAGAGATTGATGGGTTTGGTCCTGTAGATCATACACCCACTTCTCAAGATCTTCATGACAAGTTTCCTTATCTTGATCAGTTGATTAAAGAGGGGATGAGGTTTTACACTGTCTCCCCATTAGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGATACCTTCTCCCAAAGGGGACTTGGGTCTGGTTAGCCCTTGGAGTTCTAGCAAAAGATCCAAGAAACTTTCCAGAACCAGAAAAGTTCAAACCAGAGAGGTTTGACCCCAACTGTGAAGAAATGAAACGAAGGCATCCTTATGCTTACATACCGTTTGGAATTGGTCCTCGGGCTTGCATTGGTCAGAAATTTACCCTACAAGAGATAAAGCTTTCTCTGATTCATTTATACCGGAGATACTTGTTTCGGCATTCACCTAATATGGAGAATCCCGTAGAACTCGATTATGGCATAGTCCTCAACTTCAAGCATGGTGTCAAGCTCAGAGCCATAGCAAGAACAGAGAGGAGTTGCTAA 1593 0.4237 MVLMDLEWPFPIPSVPYASTIMFTLVALIGGLFVYLYGPYWGVRKVPGPKSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEVSIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLSGLVPTMQSFIESATQNLDSQKEDIIFSDISLRLATDVIGEAAFGVNFGLSKPHSVSDAGASNEVSDFINQHIYSTTQLKMDLSGSFSIIVGLLVPILQEPFRQILKRIPGTMDWKIERTNQKLSGRLDEIVENRMKERNRTSKDFLSLILNAKESKALSEKVFTPDCISAVTYEHLLAGSATTAFTLSSIVYLVAGHPEVEKKLLEEIDGFGPVDHTPTSQDLHDKFPYLDQLIKEGMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEKFKPERFDPNCEEMKRRHPYAYIPFGIGPRACIGQKFTLQEIKLSLIHLYRRYLFRHSPNMENPVELDYGIVLNFKHGVKLRAIARTERSC 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00045 530 PANTHER THROMBOXANE-A SYNTHASE 19 527 - -
Gabi3450g00045 530 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 SUPERFAMILY Cytochrome P450 40 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Gabi3450g00045 530 Pfam Cytochrome P450 47 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 Gene3D Cytochrome P450 32 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00045 530 FunFam Cytochrome P450 3A4 33 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00045 Gabi-Chr3450 351226 358317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00045 84 525 Cytochrome P450 AT2G26170 74.887 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00045 K20771 - gmx:100797803 927.932