Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00044 ATGGTGTTGATGGATTTGGAATGGCCGTTTCCAATTCCAAGTGTCCCTTATGCTTCAACAATAATGTTCACCCTGGTGGCGTTAATAGGGGGATTGTTTGTTTATCTGTATGGGCCGTATTGGGGTGTAAGGAAGGTTCCAGGCCCAAAATCTCTGCCGCTGGTAGGACACCTTCCCTTGCTGGCTAAGTATGGTCCTGATGTGTTCTCAGTCCTTGCAAAGCAATATGGTCCAATCTACAGATTTCATATGGGAAGACAGCCACTAATAATTATAGCAGATGCAGAGCTTTGTAAAGAGGTCTCCATAAAAAAATTTAAAGATATTCCAAACCGAAGTATTCCCTCTCCTATTTCTGCTTCCCCTCTTCACCAAAAAGGCCTCTTCTTCACCCGGGATTCACAATGGTCCACCATGAGAAATACAATATTGTCGGTGTACCAGCCATCACACTTATCCGGATTAGTGCCTACAATGCAGTCATTCATAGAATCTGCGACCCAAAATCTTGACTCTCAAAAAGAAGACATTATCTTCTCTGATATATCTCTCAGACTGGCAACTGATGTGATTGGAGAGGCAGCCTTTGGTGTCAACTTTGGCCTCTCTAAGCCTCATTCAGTTAGTGATTCAATCAATAGTGTTAACAACAGTAACAACAAAGTAGGTGATGCAGGTGCTAGTAATGAAGTATCAGATTTCATCAATCAACACATTTACTCAACAACCCAACTTAAGATGGACTTATCTGGTTCCTTCTCCATCATAGTGGGTCTACTTGTTCCAATACTTCAGGAGCCATTTAGGCAGATTTTGAAGAGAATACCAGGCACCATGGACTGGAAAATTGAGCGTACTAATCAGAAACTAAGTGGCCGTCTTGATGAGATTGTGGAAAATAGAATGAAAGAGAGGAACCGAACTTCAAAGGATTTCTTGTCACTCATACTAAATGCCAAAGAATCAAAAGCCTTATCAGAAAAAGTCTTCACCCCTGATTGCATTAGTGCTGTTACTTATGAGCATCTACTTGCTGGGTCAGCAACCACGGCCTTCACTTTGTCTTCCATTGTCTATTTGGTTGCTGGACATCCAGAAGTTGAGAAAAAGCTACTTGAAGAGATTGATGGGTTTGGTCCTGTAGATCATACACCCACTTCTCAAGATCTTCATGACAAGTTTCCTTATCTTGATCAGTTGATTAAAGAGGGGATGAGGTTTTACACTGTCTCCCCATTAGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGATACCTTCTCCCAAAGGGGACTTGGGTCTGGTTAGCCCTTGGAGTTCTAGCAAAAGATCCAAGAAACTTTCCAGAACCAGAAAAGTTCAAACCAGAGAGGTTTGACCCCAACTGTGAAGAAATGAAACGAAGGCATCCTTATGCTTACATACCGTTTGGAATTGGTCCTCGGGCTTGCATTGGTCAGAAATTTACCCTACAAGAGATAAAGCTTTCTCTGATTCATTTATACCGGAGATACTTGTTTCGGCATTCACCTAATATGGAGAATCCCGTAGAACTCGATTATGGCATAGTCCTCAACTTCAAGCATGGTGTCAAGCTCAGAGCCATAGCAAGAACAGAGAGGAGTTGCTAA 1635 0.4208 MVLMDLEWPFPIPSVPYASTIMFTLVALIGGLFVYLYGPYWGVRKVPGPKSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEVSIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLSGLVPTMQSFIESATQNLDSQKEDIIFSDISLRLATDVIGEAAFGVNFGLSKPHSVSDSINSVNNSNNKVGDAGASNEVSDFINQHIYSTTQLKMDLSGSFSIIVGLLVPILQEPFRQILKRIPGTMDWKIERTNQKLSGRLDEIVENRMKERNRTSKDFLSLILNAKESKALSEKVFTPDCISAVTYEHLLAGSATTAFTLSSIVYLVAGHPEVEKKLLEEIDGFGPVDHTPTSQDLHDKFPYLDQLIKEGMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEKFKPERFDPNCEEMKRRHPYAYIPFGIGPRACIGQKFTLQEIKLSLIHLYRRYLFRHSPNMENPVELDYGIVLNFKHGVKLRAIARTERSC 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00044 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 478 487 IPR017972 GO:0005506|GO:0016705
Gabi3450g00044 544 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PRINTS P450 superfamily signature 476 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PRINTS P450 superfamily signature 485 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PANTHER THROMBOXANE-A SYNTHASE 19 541 - -
Gabi3450g00044 544 SUPERFAMILY Cytochrome P450 40 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 Pfam Cytochrome P450 47 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 Gene3D Cytochrome P450 32 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PRINTS E-class P450 group I signature 485 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3450g00044 544 PRINTS E-class P450 group I signature 475 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00044 Gabi-Chr3450 351226 358317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00044 84 539 Cytochrome P450 AT2G26170 72.588 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00044 K20771 - gmx:100797803 938.717