Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00036 ATGAGCGGTGAGGATGATGACCCAGAAAGAAAGAGGTTGAATTTGAAGCCCAATTCTCGGGTGACAAACTTCCAACGCGATCTCATGGCTGGGGCGGTGATGGGAGGGGCGGTGCACACCATTGTGGCCCCAATTGAGAGGGCCAAGCTTTTGTTGCAAACCCAGGAAAGCAATTTGGCTATTGTTGCAAGTGGGCGTCGCAAATTTAAGGGCATGTTTGATTGCATACTCCGTACTGTCAGGGAAGAAGGCGTTCTCTCTTTGTGGCGTGGCAATGGCAGCAGTGTTCTTCGCTATTATCCTTCCGTCGCACTCAATTTCTCTCTCAAGGATCTTTACAAAAGCATGTTAAGAGGTGGAAACTTTTATGATAATAATCTTTTCTCTGGTGCATCAGCTAATTTTGTTGCTGGGGCTGCGGCCGGTTGTACAACACTTGTTTTGGTATATCCCCTTGACATTGCACATACACGCCTTGCCGCTGACATTGGAAGGACAGAAGTGCGTCAATTTCGAGGCATTTACCATTTCTTGGCTACCATATTCCGTAAGGATGGGATTCGGGGCATTTACAGGGGCCTTCCTGCATCTCTACAAGGGATGGTGGTACACAGGGGCCTTTATTTTGGAGGCTTTGACACAATGAAAGAGATCTTGTCTGAAGAATCAAAAACTGAGTTGGCATTGTGGAAGCGTTGGGTGGTAGCTCAGGCAGTCACAACCTCTGCTGGGTTGATATCTTATCCATTAGACACGGTTCGTAGGAGGATGATGATGCAGTCTGGCATGGAAAAGCCAGTGTACAATAACACCCTGGACTGCTGGAAGAAGATCTATAGGACAGAAGGGTTGGCTTCATTTTACCGTGGGGCTGTGTCAAATGTGTTTAGGAGCACTGGTGCTGCAGCTATCTTAGTATTGTATGACGAGGTTAAGAAATTCATGAACTGGGGGCCATTGTAA 963 0.4725 MSGEDDDPERKRLNLKPNSRVTNFQRDLMAGAVMGGAVHTIVAPIERAKLLLQTQESNLAIVASGRRKFKGMFDCILRTVREEGVLSLWRGNGSSVLRYYPSVALNFSLKDLYKSMLRGGNFYDNNLFSGASANFVAGAAAGCTTLVLVYPLDIAHTRLAADIGRTEVRQFRGIYHFLATIFRKDGIRGIYRGLPASLQGMVVHRGLYFGGFDTMKEILSEESKTELALWKRWVVAQAVTTSAGLISYPLDTVRRRMMMQSGMEKPVYNNTLDCWKKIYRTEGLASFYRGAVSNVFRSTGAAAILVLYDEVKKFMNWGPL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00036 320 Gene3D Mitochondrial carrier domain 26 316 IPR023395 -
Gabi3450g00036 320 PRINTS Mitochondrial carrier protein signature 236 258 IPR002067 GO:0055085
Gabi3450g00036 320 PRINTS Mitochondrial carrier protein signature 40 54 IPR002067 GO:0055085
Gabi3450g00036 320 PRINTS Mitochondrial carrier protein signature 27 40 IPR002067 GO:0055085
Gabi3450g00036 320 PRINTS Mitochondrial carrier protein signature 91 111 IPR002067 GO:0055085
Gabi3450g00036 320 PRINTS Mitochondrial carrier protein signature 191 209 IPR002067 GO:0055085
Gabi3450g00036 320 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Gabi3450g00036 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 314 IPR018108 -
Gabi3450g00036 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 218 IPR018108 -
Gabi3450g00036 320 FunFam probable ADP,ATP carrier protein At5g56450 26 317 - -
Gabi3450g00036 320 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 22 317 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi3450g00036 320 SUPERFAMILY Mitochondrial carrier 22 310 IPR023395 -
Gabi3450g00036 320 Pfam Mitochondrial carrier protein 228 316 IPR018108 -
Gabi3450g00036 320 Pfam Mitochondrial carrier protein 23 118 IPR018108 -
Gabi3450g00036 320 Pfam Mitochondrial carrier protein 132 221 IPR018108 -
Gabi3450g00036 320 PRINTS Adenine nucleotide translocator signature 232 248 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi3450g00036 320 PRINTS Adenine nucleotide translocator signature 69 90 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi3450g00036 320 PRINTS Adenine nucleotide translocator signature 102 114 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi3450g00036 320 PRINTS Adenine nucleotide translocator signature 24 36 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi3450g00036 320 PRINTS Adenine nucleotide translocator signature 129 142 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gabi3450g00036 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 116 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00036 Gabi-Chr3450 313518 319317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00036 22 312 Antiporters AT5G13490 40.397 1.27e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00036 K05863 - qsa:O6P43_015892 557.755