Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00024 ATGACGAACTCAACCTGCGGAGGCACCGAGTCAGAACTCTGCCGAGACGAGTCAGCCGCATTCGTCCTCAAATTCGTGGCGATCGCATCCATTCTGTTGGCGGGCATGGCCGGAATCGCCATCCCACTCATCGGAAAACACTGCCGGTTCCTCAGCACCGACGGTAACCTATTCGTTGCAACAAAGGCTTTCGCGGCGGGGGTGATTCTCGCCACCGGCTTCGTCCACATGCTATCGGACGCTTCGGATGCGCTCAACAACCCGTGCTTGCCAGCATTTCCATGGTCCAAGTTTCCATTCACGGGGTTCTTCGCCATGATGGCAGCGCTCTTCACCCTCCTCCTTGACTTCGCCGGAACTCAGTATTACGAGCGCAAACAAGGGATCAACCGGGCCAACGAAGAGCAAGCACGGGTCGGGTCATCCGAACCGGACAGGAATAGCAAGGTGTTCGGAGAAGAGGAAAGTGGTGGAATGCATATAGTAGGAATGCATGCACACGCGGCGCACCATAGACACAACCACTCACATGGTAACGACGCATGCCATGGCATTAGCATTAGCATCAAGGAACACGGCCACGCGCACGGGCACTCCCACTCCCACGCAAATGAAGGTGATGTTGGGGAAGAAACTGACGTTCGACACGTCGTCGTTTCGCAGGTATTGGAGCTTGGGATTGTATCACATTCGGTGATAATTGGGTTGTCGCTAGGAGTGTCACAAAGCCCTTGTGTGATAAGACCACTAATTGCTGCATTATCATTCCATCAATTCTTTGAAGGGTTTGCACTTGGAGGGTGCATCTCGCAAGCTCAGTTCAAGACATCATCAGCGACAATAATGGCTTGTTTTTTTGCACTAACTACGCCGGTGGGTGTTGGGATTGGAACAGGAATTGCTTCGGTGTATGACCCTCATAGTCCAGGTGCACTCATAGCGGAAGGTATCTTGGATTCCTTGTCAGCGGGGATTTTAGTGTATATGGCTTTGGTAGACTTGATAGCAGCTGATTTTCTTAGCAAAAGAATGAGTTGTAACTTTAGGTTGCAGATAGTGTCTTATTGTATGCTTTTCCTTGGGGCTGGTTTGATGTCTTCGCTCGCAATATGGGCCTGA 1119 0.5139 MTNSTCGGTESELCRDESAAFVLKFVAIASILLAGMAGIAIPLIGKHCRFLSTDGNLFVATKAFAAGVILATGFVHMLSDASDALNNPCLPAFPWSKFPFTGFFAMMAALFTLLLDFAGTQYYERKQGINRANEEQARVGSSEPDRNSKVFGEEESGGMHIVGMHAHAAHHRHNHSHGNDACHGISISIKEHGHAHGHSHSHANEGDVGEETDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCVIRPLIAALSFHQFFEGFALGGCISQAQFKTSSATIMACFFALTTPVGVGIGTGIASVYDPHSPGALIAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCMLFLGAGLMSSLAIWA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00024 372 NCBIfam ZIP zinc/iron transport family 7 372 IPR004698 GO:0005385|GO:0016020|GO:0071577
Gabi3450g00024 372 Pfam ZIP Zinc transporter 22 369 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gabi3450g00024 372 PANTHER ZINC/IRON TRANSPORTER 22 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00024 Gabi-Chr3450 250520 252549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00024 2 372 Inorganic Solute Cotransporters AT1G10970 70.789 1.52e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00024 K14709 - gmx:100812212 602.438