Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00023 ATGTTCTTTATTGAGGATCTCTGGCCACTGCTCTGGCACCTCGTTGAAAAAGTTCATCTCTTCTCAGAAAAAGCATCGTTTTTCCAATATCTACCCGAATCGATGACGAACTCAACCTGCGGAGGCACCGAGTCAGAACTCTGCCGAGACGAGTCAGCCGCATTCGTCCTCAAATTCGTGGCGATCGCATCCATTCTGTTGGCGGGCATGGCCGGAATCGCCATCCCACTCATCGGAAAACACTGCCGGTTCCTCAGCACCGACGGTAACCTATTCGTTGCAACAAAGGCTTTCGCGGCGGGGGTGATTCTCGCCACCGGCTTCGTCCACATGCTATCGGACGCTTCGGATGCGCTCAACAACCCGTGCTTGCCAGCATTTCCATGGTCCAAGTTTCCATTCACGGGGTTCTTCGCCATGATGGCAGCGCTCTTCACCCTCCTCCTTGACTTCGCCGGAACTCAGTATTACGAGCGCAAACAAGGGATCAACCGGGCCAACGAAGAGCAAGCACGGGTCGGGTCATCCGAACCGGACAGGAATAGCAAGGTGTTCGGAGAAGAGGAAAGTGGTGGAATGCATATAGTAGGAATGCATGCACACGCGGCGCACCATAGACACAACCACTCACATGGTAACGACGCATGCCATGGCATTAGCATTAGCATCAAGGAACACGGCCACGCGCACGGGCACTCCCACTCCCACGCAAATGAAGGTGATGTTGGGGAAGAAACTGACGTTCGACACGTCGTCGTTTCGCAGGTATTGGAGCTTGGGATTGTATCACATTCGGTGATAATTGGGTTGTCGCTAGGAGTGTCACAAAGCCCTTGTGTGATAAGACCACTAATTGCTGCATTATCATTCCATCAATTCTTTGAAGGGTTTGCACTTGGAGGGTGCATCTCGCAAGCTCAGTTCAAGACATCATCAGCGACAATAATGGCTTGTTTTTTTGCACTAACTACGCCGGTGGGTGTTGGGATTGGAACAGGAATTGCTTCGGTGTATGACCCTCATAGTCCAGGTGCACTCATAGCGGAAGGTATCTTGGATTCCTTGTCAGCGGGGATTTTAGTGTATATGGCTTTGGTAGACTTGATAGCAGCTGATTTTCTTAGCAAAAGAATGAGTTGTAACTTTAGGTTGCAGATAGTGTCTTATTGTATGCTTTTCCTTGGGGCTGGTTTGATGTCTTCGCTCGCAATATGGGCCTGA 1221 0.5061 MFFIEDLWPLLWHLVEKVHLFSEKASFFQYLPESMTNSTCGGTESELCRDESAAFVLKFVAIASILLAGMAGIAIPLIGKHCRFLSTDGNLFVATKAFAAGVILATGFVHMLSDASDALNNPCLPAFPWSKFPFTGFFAMMAALFTLLLDFAGTQYYERKQGINRANEEQARVGSSEPDRNSKVFGEEESGGMHIVGMHAHAAHHRHNHSHGNDACHGISISIKEHGHAHGHSHSHANEGDVGEETDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCVIRPLIAALSFHQFFEGFALGGCISQAQFKTSSATIMACFFALTTPVGVGIGTGIASVYDPHSPGALIAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCMLFLGAGLMSSLAIWA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00023 406 Pfam ZIP Zinc transporter 56 403 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gabi3450g00023 406 PANTHER ZINC/IRON TRANSPORTER 55 399 - -
Gabi3450g00023 406 NCBIfam ZIP zinc/iron transport family 41 406 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00023 Gabi-Chr3450 250520 252551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00023 31 406 Inorganic Solute Cotransporters AT1G10970 70.130 3.18e-177 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00023 K14709 - gmx:100812212 635.95