Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00020 ATGGCGAGGAAATGCTCATATTGTGGAAACTTAGGTCACAATTCAAGGACTTGCAATAACAGTCTCAGTCAAAGAGAGGACTTTAATGGTGGACTAAAGCTTTTTGGAGTGCAACTTGACGCTTATTCTTCTTCATCATCCTCCACTTCTTCTTCACCTTGTTATTTTTCCATGAACACAAGTTTCAGCAACGATTTCATGCTATCTTCACGGACATCATTATCTGTACCCTCCTCGCTTTTCCAGCTTGGTGCAAATGAAAATTCAGATAGTTACTTATCAACAATCCAAGACAGGAAAAAAGGTGCGCCGTGGACGGAGGAAGAGCACCGTGTATTTCTTATAGGGCTTGAGAAGCTGGGGAAGGGTAACTGGAGAGGCATATCTAAAAGTTTTGTGACAACAAGAACACCAACCCAAGTGGCAAGTCATGCACAAAAATATTTTCTCCGTCAATCTCAGAATAGCTTCAATGGAAGAAAACGCCGTCCTAGCCTGCTTGATGTGAGTAAATTAAACTGGTTTACTAATTTGACATCAAATGGTATAGACTGCATCAGCCAATTGAGTAGAAATAGAATTTTTCTTTCTCAGTGGCATTCACATCCTCCTCATTCAGTGCTGAATTGGCCAAACTCTTCAACAAATTGCACTCTTCAAAGCGCAGCCCCTGATTTAGAACTCAAACTTGCAACTCCCACACCATTGGAGCTAAAAGAGGAATGCTCTGCAGGCCATTTGAGTTGA 747 0.415 MARKCSYCGNLGHNSRTCNNSLSQREDFNGGLKLFGVQLDAYSSSSSSTSSSPCYFSMNTSFSNDFMLSSRTSLSVPSSLFQLGANENSDSYLSTIQDRKKGAPWTEEEHRVFLIGLEKLGKGNWRGISKSFVTTRTPTQVASHAQKYFLRQSQNSFNGRKRRPSLLDVSKLNWFTNLTSNGIDCISQLSRNRIFLSQWHSHPPHSVLNWPNSSTNCTLQSAAPDLELKLATPTPLELKEECSAGHLS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00020 248 SMART sant 101 151 IPR001005 -
Gabi3450g00020 248 NCBIfam myb-like DNA-binding domain, SHAQKYF class 100 152 IPR006447 GO:0003677
Gabi3450g00020 248 ProSiteProfiles Myb-like domain profile. 97 149 IPR001005 -
Gabi3450g00020 248 SUPERFAMILY Homeodomain-like 99 153 IPR009057 -
Gabi3450g00020 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 153 IPR017930 -
Gabi3450g00020 248 Gene3D - 103 154 - -
Gabi3450g00020 248 CDD SANT 104 149 IPR001005 -
Gabi3450g00020 248 FunFam transcription factor MYB1R1 103 154 - -
Gabi3450g00020 248 PANTHER TRANSCRIPTION FACTOR KUA1 3 174 - -
Gabi3450g00020 248 Pfam Myb-like DNA-binding domain 104 149 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00020 Gabi-Chr3450 201888 203321 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi3450g00020 Myb_DNA-binding 3.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00020 - - aprc:113866246 285.034