Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3450g00010 ATGGGTATCTGCATATCAACTGAATCTTCAGCGATTCATGGGGCGCCAGAACCTGAAGAAGGTCGTGATGAAAATGTAATAATATTTGAATCAAGCAATGTTCTATGTGAGACTCCGAGACTTTGCTCTGTTTACTCTAAACAGGGTAGCAAAGGACTCAACCAAGATGCTGCCACTTTTCTTCAGGGTTTTGGGACGAAAGACGCAGCATATTGTGGCGTGTTTGATGGACATGGAAGGAATGGTCACATAGTGAGCAAAATAGTAAGCAAGCGTGTGTTTTCACTCATATTGAACCAAAAGGATGCTCACTCGAAGATTGATGATGCGTTAGAAAAGGGTGATGAGAACATCCTAAACCATGTCGACAAGGTGGAAGACGATAAGGGTCCAAACAAGAATATTCAAGAATGGGAAGAAGCTATTCTTAGTGCTTTCAGGGTGATGGACAAGGAGGTGAAGCTACAAGAGAATATAGACTGCTCTTGCAGTGGAACCACAGCTGTAGTTGTCATAAGAGAGGGTGAAGATCTTGTCATAGCTAACCTCGGTGACTCGAGAGCAATCTTGGGGACAGTCTCTGACGATGAGATCATACCCATTCAATTGACCACGGATATGAAGCCAGGATTACCTCGCGAAGCAGATCGAATAAGAAGTTGCAATGGTCGCGTATTTGCGTTGAAGGAAGAATCACACATTCAGCGAGTGTGGTTACCCAATGAGAACTCCCCAGGCCTAGCCATGTCTCGAGCTTTTGGAGATTTCATGCTCAAAGACCACGGTATCATTGCCATTCCAGATATTTCGTATCGCTCTCTAACATCCAGTGACCAATTTATTGTACTTGCAAGTGATGGGGTGTGGGATGTACTGAGCAACAACGAGGTTTCTTCAATTGTGTGGACGGCAGACACTGAAAAGGAAGCAGCAAAGGCAGTAGTGGAAGCAGCCACCGCCACATGGAAAAACAAGTACCCTTTTTCCAAAGTAGATGACTGCACCGTGGTTTGCCTCTTCCTGCAGAAGAAAAGAAACAAAACCTTGTACACTTAA 1056 0.4451 MGICISTESSAIHGAPEPEEGRDENVIIFESSNVLCETPRLCSVYSKQGSKGLNQDAATFLQGFGTKDAAYCGVFDGHGRNGHIVSKIVSKRVFSLILNQKDAHSKIDDALEKGDENILNHVDKVEDDKGPNKNIQEWEEAILSAFRVMDKEVKLQENIDCSCSGTTAVVVIREGEDLVIANLGDSRAILGTVSDDEIIPIQLTTDMKPGLPREADRIRSCNGRVFALKEESHIQRVWLPNENSPGLAMSRAFGDFMLKDHGIIAIPDISYRSLTSSDQFIVLASDGVWDVLSNNEVSSIVWTADTEKEAAKAVVEAATATWKNKYPFSKVDDCTVVCLFLQKKRNKTLYT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3450g00010 351 SMART PP2C_4 32 339 IPR001932 -
Gabi3450g00010 351 SUPERFAMILY PP2C-like 37 342 IPR036457 -
Gabi3450g00010 351 ProSiteProfiles PPM-type phosphatase domain profile. 41 341 IPR001932 -
Gabi3450g00010 351 Gene3D - 33 344 IPR036457 -
Gabi3450g00010 351 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3450g00010 351 PANTHER PROTEIN PHOSPHATASE 32 339 IPR015655 GO:0004722|GO:0006470
Gabi3450g00010 351 Pfam Protein phosphatase 2C 107 319 IPR001932 -
Gabi3450g00010 351 CDD PP2Cc 40 341 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3450g00010 Gabi-Chr3450 115257 116802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3450g00010 1 348 PP2C-type Phosphatase Gene Family AT5G26010 51.268 3.21e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3450g00010 - - gmx:100795893 530.791