Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3440g00002 ATGTCTACACCTTTTGTAGTGAAGGTTCTTGAGCAATACAGAGTCACTCCGCCACCCAATAAAACCCCAACAACCTCTATCCTCCCATTAACCTTCTTTGACCTTCCTTGGCTTTTCTTCTCCCCAAGCCAGCCTCTGTTTTTCTATGAATTCCCTCATCCAATTTCTCACTTTAAAAGTACGACCCTTCCAAAACTGAAGCAATCTCTCTCCCTTACACTTCAACATTACTATCCTTTTGCCGGTAGCTTTGTGTCCTCACCTAATCTTGCCAAACCCCAACTCATTTTCACTGATAACAAGTCAGTTTCATTAACAATCACTGAGTCAAATGGCGACTTTAAGCACTTGTGCAGCAATCAACCAAGAGATGTTATCGACTTTCACCCACTTGTACCGAAATTGGCATCAAGTTTTTCATATGAAGGGAAAGAGTTTCCTTTGCTAGCTATTCAAATAACGATATTCCCAAATGTAGGCATATGCATTGGCCTTGCTTTTCACAATGTTGTTGCTGATGGGAGAACCTTCCACAATTTCTTCAAGACATGGGCTTCATATTGTAGATTTGGAGGTTCACCATTACCGCTAAAGTCACTACCGTTGTTTGATCGAAGTGTAATAATTGATCCTAAAGGCCTTCAGGAGGTTTTCTTGAAAGAATGGAGAAATAGAAGACTAGTGCAGAACATTGTCATAGGTAGAGAAGCCAAAGTAGATCTCTCAAGCATGGTTCGAGCCACTTTCTTAATGGGTACAACAGAAATGGATAAAATCAAGTGTTTGATTATTGATTGCTGTAAAGAAAAGAATCATTCTCAGCCTGTGCATTTATCTACTTATGTATTAACTTGTGCTTTTCTATGGGTTTGTTTGCTCAAAACCGAACAGAGTGTGAATGAGAAAATGGGGCTTGAAGATCCCACATACTTTGGATTCATTGCTGGTGGTATAACCAGGTTGGACTATCCAGTGCCTATGACATATTTGGGTAATTGTGTTGGCTTCGGTAGGGCATGTGTGAGAAGAAACGAATTACTTGGAGAAGACGGGATTGTGGTTGCAGCCAAAGCAATTGGAAGCACAGTTAAAAGGCTTGATGCATCAATTTTTGCGGGAGCAGAAACATGGATTCTGGACTGGGACGTGTTCCATGGGTCAGAGCACCATGTGCATATTACCTGGTCTCCAAAATTGAAGCTTTACGAATCGGATTTTGGGTGGGGAAAACCCAAGAAAATAGAGGAGATCTCAATTGATTCTACGAGAGCTGTTTCACTTGTACAGAGCAGATATATTGAGGGTGGAATTGAGATAGGCTTAGCTTTGCCTAAGAATAAAATGGATACTTTCTCCATTTTGTTCACCAAAGGACTTAACGCTCTTCCATGA 1392 0.4088 MSTPFVVKVLEQYRVTPPPNKTPTTSILPLTFFDLPWLFFSPSQPLFFYEFPHPISHFKSTTLPKLKQSLSLTLQHYYPFAGSFVSSPNLAKPQLIFTDNKSVSLTITESNGDFKHLCSNQPRDVIDFHPLVPKLASSFSYEGKEFPLLAIQITIFPNVGICIGLAFHNVVADGRTFHNFFKTWASYCRFGGSPLPLKSLPLFDRSVIIDPKGLQEVFLKEWRNRRLVQNIVIGREAKVDLSSMVRATFLMGTTEMDKIKCLIIDCCKEKNHSQPVHLSTYVLTCAFLWVCLLKTEQSVNEKMGLEDPTYFGFIAGGITRLDYPVPMTYLGNCVGFGRACVRRNELLGEDGIVVAAKAIGSTVKRLDASIFAGAETWILDWDVFHGSEHHVHITWSPKLKLYESDFGWGKPKKIEEISIDSTRAVSLVQSRYIEGGIEIGLALPKNKMDTFSILFTKGLNALP 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3440g00002 463 PANTHER - 7 461 - -
Gabi3440g00002 463 Pfam Transferase family 7 452 - -
Gabi3440g00002 463 Gene3D - 242 462 IPR023213 -
Gabi3440g00002 463 Gene3D - 6 233 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3440g00002 Gabi-Chr3440 37150 38541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3440g00002 39 451 Monolignol Biosynthesis Gene Families AT5G48930 22.970 2.62e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3440g00002 - - gmx:100817166 702.205