Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3428g00037 ATGCCAAAAATGAAGCATCTACTCAGAAAGCTTCACATCGGTGGTGGCGCTGCTACAATCAATCACAATCACATATTGCCTCACGCTGATCCTCTCACACACACTCCTCCTTCTTCTTCTTCCTCTCTTCCCTCGCCGTCTACTCCAACCGTCGTCGTTTCGGATCCGAACCCTGTCGTTGAGTCGGAAAACGACAACGGTAGCACCAACGAGGGTGTCGTTGATTTCAATCTGTTGCAGGAAGAAGAGTTTCAGATGCAGTTGGCTCTGGCAATCAGCGCTTCTGATCCCGATCTCCACGAACTAGCTGAATCTGCACAGATCGATGCCGCCAAACAGATGAGCCTCGGTTATTCTGCTTCTCTCACTGACACCAAAGCCCTTGTTCAGTTTCAATCCCTTCGTTATAGGAACTACAATGTCATTGCTTATGATGAGAAAGTGATGGATGGATTTTATGATGTTTATGGGATTACCTCCAATTTGATTGAACGAGGAAAGATGCCGTTGTTGGTGGATCTGCAAACTACGCCTGTCTCAGGGAATGTTGATTGTGAAGTGATTTTGGTGAACCGTGTAGTGGATATGGAACTGAATCTGCTGGAGAAAAAAGCATGTGCTTTGTTCAATGAGTGTTCTGTTTCTGAACTAGGACTAATGTTGAGTGGCTTACTTCAGAAACTTGCTGATATTGTTGTTAATAGAATGGGTGGACCAGTTGGTAATGCTGAAAAAATCACCAAAAGGTGGGCTATGAGGAGTCGTGAATTACGAGATTCTTTAAGAACCACTGTCCTTCCCCTTGGCTGTCTCGATGTTGGACTTTCGCGTCACCGAGCCCTACTTTTTAAGGTACTTGCTGATAGGATTAATATTCCCTGCATGCTAGTAAAAGGGAGCTATTACACAGGAACTGACGATGGGGCTGTGAATTTGATTAAAGCTGATGATGGAAGTGAATACATTATTGATATGATGGGTGCTCCCGGCATTCTTATTCCTGCTGAGGTACCCAGCAGTCAACTCCAAAACTACGGTTTTGCTGTTAGGGGTTGTGCAGAGATTGTAGGACTACCTAACAACACGCATGCGATGCTTGATGATGCAACTGGTGTGCCGGGAGTCTTGTCTGATTATGGTAGAATTTCAACAATGGGGATGGTCCAGACAGAAGAACTATTAGATATGGGCAGTCAAACAAAACCAGATGAAATAAATTATGTTGATGTGAATGAAACAGCGAGATTTAAACATACAGAGGCATATGAATGCTCATCACATACAGAACCATCACCTGCAGAAATGATGCATGTAAAAGATGTCTCTGAGTATGTTCTCAGTGCAACTAAGCACCCAGAATTTGCTCAAAAACTGCACACTGTTCTAGTAGAGAGTGGAGCATTACCTCCTCCTGATCTATTTTCAGATATGAATCCCCGAGATAGGGGTGTAGATAAAGCAAATGAAATTTTTTTTGTTGATACTGTTCAAGCTGACCCAAATAGGTTGTTACTAAACTATAAGAAGTCTCTCAAGCCCTCTCAAGGGGTGGGCTCTGGGAGCGATACTAGGTTGTGTCAATCTGCTGACCAGTTAGCTGAACAGCGAAAAGAATTTCATACAGATGCCATTAGTTTTTGTAATTCTTCACAGAGTGATAATACAAGGAATTGGTTTGTAACTGTTTCTGATAGAGATGATGGTTTAGAGCAATCTAATGACATTGAATTGGAGAAAGATTCAGCAATTCAAATAAATGAGACAGTCAATGGAGATTGTAACCTATTTGATGGTAAAAGCAAGGAAGTAAACCCAGTACTTGGTGAAGGCACAGAATGGGAAATTCAATGGGAGGATCTTCGTATTGGTGAGCGTATTGGTATTGGTTCTTATGGTGAAGTTTATCATGCTGATTGCAATGGCACTGAAGTTGCTGTGAAGAAGTTTCTAAACCAAGATTTCTCTGGTGATGCACTAGCTCAGTTCAAGTCTGAAATTGAGATCATGTTAAGAATGCGGCATCCTAATGTTGTGCTCTTCATGGGAGCAATAACTCGTGCCCCACACTTCTCTATTTTGACAGAGTTTCTTCCAAGAGGCAGCTTATATAGGCTGTTGCATCGTCCCAATCTTCGACTTGATGAGAAGAGGCGGTTGCGTATGGCTCTTGATGTGGTCTGTGATTTTGGTATGTCACGGATGAAGCACCATACTTTTTTGTCATCAAAGTCTTGTGCTGGAACGCCTGAGTGGATGGCACCAGAAGTCTTAAGAAATGAGCCAGCTAATGAGAAGTGCGATGTTTATAGTTTTGGTGTGATCTTGTGGGAATTGACTACTATAAGAATCCCATGGAAAGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAATAAACGGCTTGAAATTCCAGAAGATGTTGATCCAGTAGTTGCACAAATAATACGTGATTGCTGGCAAATGGAGCCACACTTGCGGCCATCATTCTCACAGCTAATGTCTCGTCTCAGTCGTCTTCAAAATCTGGTTCTCCCAAAAACGAGCTCAACAGATTAA 2565 0.4269 MPKMKHLLRKLHIGGGAATINHNHILPHADPLTHTPPSSSSSLPSPSTPTVVVSDPNPVVESENDNGSTNEGVVDFNLLQEEEFQMQLALAISASDPDLHELAESAQIDAAKQMSLGYSASLTDTKALVQFQSLRYRNYNVIAYDEKVMDGFYDVYGITSNLIERGKMPLLVDLQTTPVSGNVDCEVILVNRVVDMELNLLEKKACALFNECSVSELGLMLSGLLQKLADIVVNRMGGPVGNAEKITKRWAMRSRELRDSLRTTVLPLGCLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGILIPAEVPSSQLQNYGFAVRGCAEIVGLPNNTHAMLDDATGVPGVLSDYGRISTMGMVQTEELLDMGSQTKPDEINYVDVNETARFKHTEAYECSSHTEPSPAEMMHVKDVSEYVLSATKHPEFAQKLHTVLVESGALPPPDLFSDMNPRDRGVDKANEIFFVDTVQADPNRLLLNYKKSLKPSQGVGSGSDTRLCQSADQLAEQRKEFHTDAISFCNSSQSDNTRNWFVTVSDRDDGLEQSNDIELEKDSAIQINETVNGDCNLFDGKSKEVNPVLGEGTEWEIQWEDLRIGERIGIGSYGEVYHADCNGTEVAVKKFLNQDFSGDALAQFKSEIEIMLRMRHPNVVLFMGAITRAPHFSILTEFLPRGSLYRLLHRPNLRLDEKRRLRMALDVVCDFGMSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTIRIPWKGLNPMQVVGAVGFQNKRLEIPEDVDPVVAQIIRDCWQMEPHLRPSFSQLMSRLSRLQNLVLPKTSSTD 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3428g00037 854 Gene3D Transferase(Phosphotransferase) domain 1 699 850 - -
Gabi3428g00037 854 FunFam Serine/threonine-protein kinase isoform 1 611 698 - -
Gabi3428g00037 854 Pfam Protein tyrosine and serine/threonine kinase 726 839 IPR001245 GO:0004672|GO:0006468
Gabi3428g00037 854 Pfam Protein tyrosine and serine/threonine kinase 620 725 IPR001245 GO:0004672|GO:0006468
Gabi3428g00037 854 MobiDBLite consensus disorder prediction 33 71 - -
Gabi3428g00037 854 MobiDBLite consensus disorder prediction 26 71 - -
Gabi3428g00037 854 CDD STKc_MAP3K-like 626 839 - -
Gabi3428g00037 854 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
Gabi3428g00037 854 Gene3D Phosphorylase Kinase; domain 1 613 697 - -
Gabi3428g00037 854 SUPERFAMILY Protein kinase-like (PK-like) 609 838 IPR011009 -
Gabi3428g00037 854 Pfam Ethylene-responsive protein kinase Le-CTR1 130 333 - -
Gabi3428g00037 854 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 726 845 - -
Gabi3428g00037 854 ProSiteProfiles Protein kinase domain profile. 620 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3428g00037 Gabi-Chr3428 455150 466113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3428g00037 1 853 MAP Kinase Kinase Kinase AT5G11850 52.366 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gabi3428g00037 EDR1 5.2e-69 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3428g00037 K04424 - gmx:100779137 1240.71