LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi3421g00001	ATGGAATCTCAGGCTACTCAACTCAATTTTGTTGTTGGATCTCATATCTGGATTGAGGACCCTGATGAAGCTTGGATAGATGGAGAAATCCTGGAATCTAATGATGAAGGGATCACAGTAAGCAATGCATCAGGGACGAGGGTTGTGAGCAAATCAGTTAATATCTATCCCAAAGATCCTGAATTCCCACCAAACGGTGTGGAAGATATGACAAGACTGGCATATTTGCATGAACCAGGGGTACTTCAAAATTTGCAACTTCGATATGACTTAAATGAAATATATACATACACAGGAAATATTTTGATAGCAGTGAACCCTTTTCAAAGGTTACCTCATTTGTATGCCAGTGAAACAATGGCACAGTATAAAGGTGCAGCTTTCGGTGAGCAGAGCCCCCATCCTTTTGCAATTGCAGCTCATGCATATAGGAAGATGATAAACGAAGAAACAAGTCAATCTATTTTGGTTAGTGGGGAGAGTGGAGCAGGTAAAACAGAAAGTACAAAGATGCTTATGCATTATCTTGCTTATATGGGAGGGAGAGTAGCAACTGAGGGACGACGGTCAGTGGAGCAACAAGTTCTGGAGTCCAATCCAGTTTTAGAAGCATTTGGCAATGCAAAGACTGTTAGGAACAACAATTCTAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCCATCAGAACTTATTTGCTGGAACGATCCCGTGTCTGTCAAGTTTCTGATCCTGAGAGAAATTACCATTGCTTTTATATGCTTTGTGCTGCACCAAAAGAGGATACAAATAAGTACAAATTGGGAGATCCAAGAACATTTCGTTACCTCAATCAATCGAATTGCATTGAGCTGGATGGGCTGGATGATTCTAAGGAGTACCTTGCAACTAGGAGAGCCATGGATGTAGTTGGGATCAGCTCTGATGAGCAGGATGCTATATTTCGAGTAGTAGCTGCAGTACTTCATTTGGGAAACATTGAATTTGTTAAGGGAGTGGATGAAGAGATGGATTCCTCTCAACCAAAGGATGAAGAATCCCATTTCCACCTAAAAACTGCAGCTGAACTTTTTATGTGTGATGAGAAGTCCCTTGAAGACTCTTTCTGCAAACGTGTTATGGTGACTCGTGGTGAGGCCATAACAAAATGGCTTGATCCAGTTTCTGCAGCTCTCAGTAGAGATGCATTTGCTAAAATAGTTTATTCAAGGCTTTTTGACTGGATTGTGAACAAGATTAACAACTCTATTGGGCAAGATCCAGATTCAAAGAGCTTAATTGGGGTTCTAGATATTTATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATCAAAAGGAAGAGATTGATTGGAGTTACATAGAGTTCGTTGATAATCAAGATGTTCTTGATCTCATAGAAAAGAAACCTGGCGGCGTTATTGCTCTTCTGGATGAGGCTTGTATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTATATCAAACATTTAAAGATAATAAACGCTTCAGCAAGCCAAAGTTGTCTCGTACAGACTTCACCATTAACCACTATGCTGGTGATGTCACATATCAAACTGATCATTTCCTTGACAAAAATAAAGACTATGTTGTTCCAGAGCATGCTGCTTTACTCAGTGCTTCGAAGTGCTCCTTTGTTTCAGGGTTGTTCCCACCTTTACCCGAGGAAACTACAAAGTCAACGAAGTTCTCTTCTATAGCCACTCAGTTTAAGCAACAACTGCAAGCTTTGCTTGAAACACTGAGTGCTACTGAGCCACACTACATTCGTTGTGTAAAGCCAAATAATCTTCTTAAGCCAGGGATATTCGAGAACAACAATGTGCTGCAGCAGCTTAGGTGTGGGGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATATCCCACTAGAAAGAACTTTGATGAATTTGTTCAGCGTTTTACTATCTTGGAACCTAAGGTTCTGAAAGCATGCCCTGATGAGATGACTGCTTGCAAGAGGCTTCTAGATAGAGCGAACCTTAAAGATTATCAGATTGGAAAGACCAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGCGTGTCGTGCTGTGGTCTTAGGAAGATCCGCAAGCATTATTCAGAGAAACGTTCGCACATTTATTTGCCGGAAACACTTCTTGTTATTGCAGTTGTCTGCCATAGAATTACAAAGGGTGGTTAAAGGACAACTTGCACGCCATCAGTATGAATGCATGAGGAGGGAAGATGCTTCTTTGAAAATCCAAAAATACTTCCGCATGTATCTTTCCAGAAATTCTTACAAAACTATTTATGCCACTGCTGTTGATATTCAAACTGGTATGCGAGGGATGGCTGCTAGAAATGACCTTAGATTCAGGAAGCAGACACATGCTGCAGTTATTATTCAGGGTCACTATAGAGGTCATTCAGCTCGTACTCGTTTCAAAAGCCTAAAGAAAGCAACAATTGCTGTGCAGTGTTCCTGGAGAAGAACACTTGCACGTAGAGAACTTCGAAAGCTTAAAATGGCTGCTAAGGAAGCCAAGGCTCTTGAAGCTGCGAAAAATAATCTGGAAAAGCAAGTCGAAGAACTAACTTCATGTCTAGAAACAGAGAAGAGAATGAGGGGTGATATTGAGGAAGCCAAGACACAGGAAAATGAAAAATTACAATGTGCTTTGCAAGAGATGGAGCTTCAGTTCCAAGAAACTACGGCAATGCTCATTAAGGAACGAGAGGCTGCCAAGAAAGGAGCTGAGCAAACTCCAAGAACACAGGAGATTTCTGTTAATGCTACTGACAATGAATTGATCAATAAGCTTACTGCAGAAAATGAACAACTTAAGGAACAGGTTAATTCATTGGAAAAGAAAATTGATGAAGCAGAGAAGAAATATGAAGAAAGTAGCAGGCTTAGTGAAGAGCGCATGAATCAAATTATAGAGACAGAATCAAGGATGATTGATCTAAAGACAAAAATGCAGAGGCTTGAAGAAAAACTCTCTGATATGGAAACTGAGAATCAAATTTTGCGGCAACAAGGCTTGTTGAGTTCATCATCTAGGAGAATGTCAGGAAAGTTTTCATCTGCTGCAGTTCCGGCACCAGCAAAAACATTCGGTTCAGAGGTTATCAGGAGATCTCACATGGAGAAGCACCAAGAAAGTGTAGATGCTCTTTTCAAATGTGTGACAAAAGATCTTGGGTTCTCCGAAGGAAAACCTGTTGCAGCATTTACCCTTTATAATTGTCTGCTACATTGGAAATCTTTTGAAGCAGAAAAGACAAGTATATTTGATCGTCTTATTCAGCTGATTGGTTCTGCAATAGAGGATCAGGACAATAATGATTGTATGGCTTATTGGTTATCAAACACATCTGCTTTGTTCTTCCATCTTCAGAGATGTCTAAGAGTACCAGCACGGAAACCACCTACCCCAACAGGGTTTTTTGGGAGGATGACCCAGGGTTTCCGGTCTTCCAATAGTCTATCCAGTAATGCACTTGATTTAGAACATCAGGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAGCAGCAGCTTGCAGCTTATGTGGAAAAGATTTACGGAATCATTCGAGAAAATTTGAAGAAAGACTTGTCACCTCTGCTTTCTTCTTGCATTCAGGCGCAGACAACATCAAATGACAACAGCAAACCAGATGCTTCTTGGCTCAGCATCATTGAGTGCCTTAATAGATTTCTCAAGATTCTGAAAGAAAATTATGTTCCTCCTCTTCTAGTTCAGAAGATATTTAATCAGGTTTTACACTACATCAATGTGGAAATCTTTAATAGCATTCTTTTGCATCAAGAATGCTGCACATTCAGCAATGGAGAATATGTAAAATCAGGGTTGGCTGAGTTAGAACTATGGTGTAATGAAGCAACAGAGGAGTATGTTGGCTCATCTTTGGATGAACTCAGACATGCGCGGCAAGCAGTTAGACTCTTGGTTGCACAAGAGAAGGATGGACTATCCTATGATGATCTTACGAATGACCTGTGCCCTGTCTTGAGTGCTAATCAGCTTTATAGAATATGTACACTTTACGAGGATGGCAATGACAATACTCTAAGTGTATCATCAGATGTCACTACTAGGTTGAAGCTTTTGATGACAGATGATGCAGATGATGATAACAAATCCTTCTTGTTGGAAGACAATTCAAGTACTCCTACAATAGTTGAAGAGATTTCTAGTTCCCTTCAAGATAAGACCATTCCAAAAGTAAAACCTCCTGCAGAACTTCTTGAGAATGCATCCTTCCAATTTTTACATGATTATTCTTAG	4440	0.4016	MESQATQLNFVVGSHIWIEDPDEAWIDGEILESNDEGITVSNASGTRVVSKSVNIYPKDPEFPPNGVEDMTRLAYLHEPGVLQNLQLRYDLNEIYTYTGNILIAVNPFQRLPHLYASETMAQYKGAAFGEQSPHPFAIAAHAYRKMINEETSQSILVSGESGAGKTESTKMLMHYLAYMGGRVATEGRRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDTNKYKLGDPRTFRYLNQSNCIELDGLDDSKEYLATRRAMDVVGISSDEQDAIFRVVAAVLHLGNIEFVKGVDEEMDSSQPKDEESHFHLKTAAELFMCDEKSLEDSFCKRVMVTRGEAITKWLDPVSAALSRDAFAKIVYSRLFDWIVNKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYQKEEIDWSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTINHYAGDVTYQTDHFLDKNKDYVVPEHAALLSASKCSFVSGLFPPLPEETTKSTKFSSIATQFKQQLQALLETLSATEPHYIRCVKPNNLLKPGIFENNNVLQQLRCGGVMEAIRISCAGYPTRKNFDEFVQRFTILEPKVLKACPDEMTACKRLLDRANLKDYQIGKTKVFLRAGQMAELDACRAVVLGRSASIIQRNVRTFICRKHFLLLQLSAIELQRVVKGQLARHQYECMRREDASLKIQKYFRMYLSRNSYKTIYATAVDIQTGMRGMAARNDLRFRKQTHAAVIIQGHYRGHSARTRFKSLKKATIAVQCSWRRTLARRELRKLKMAAKEAKALEAAKNNLEKQVEELTSCLETEKRMRGDIEEAKTQENEKLQCALQEMELQFQETTAMLIKEREAAKKGAEQTPRTQEISVNATDNELINKLTAENEQLKEQVNSLEKKIDEAEKKYEESSRLSEERMNQIIETESRMIDLKTKMQRLEEKLSDMETENQILRQQGLLSSSSRRMSGKFSSAAVPAPAKTFGSEVIRRSHMEKHQESVDALFKCVTKDLGFSEGKPVAAFTLYNCLLHWKSFEAEKTSIFDRLIQLIGSAIEDQDNNDCMAYWLSNTSALFFHLQRCLRVPARKPPTPTGFFGRMTQGFRSSNSLSSNALDLEHQVDAKYPALLFKQQLAAYVEKIYGIIRENLKKDLSPLLSSCIQAQTTSNDNSKPDASWLSIIECLNRFLKILKENYVPPLLVQKIFNQVLHYINVEIFNSILLHQECCTFSNGEYVKSGLAELELWCNEATEEYVGSSLDELRHARQAVRLLVAQEKDGLSYDDLTNDLCPVLSANQLYRICTLYEDGNDNTLSVSSDVTTRLKLLMTDDADDDNKSFLLEDNSSTPTIVEEISSSLQDKTIPKVKPPAELLENASFQFLHDYS	1479

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi3421g00001	1479	ProSiteProfiles	Myosin N-terminal SH3-like domain profile.	11	60	IPR004009	GO:0003774\|GO:0005524\|GO:0016459
	Gabi3421g00001	1479	PRINTS	Myosin heavy chain signature	152	177	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Gabi3421g00001	1479	PRINTS	Myosin heavy chain signature	488	516	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Gabi3421g00001	1479	PRINTS	Myosin heavy chain signature	200	227	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Gabi3421g00001	1479	PRINTS	Myosin heavy chain signature	95	114	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Gabi3421g00001	1479	PRINTS	Myosin heavy chain signature	435	463	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Gabi3421g00001	1479	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	790	888	IPR027417	-
	Gabi3421g00001	1479	Coils	Coil	922	949	-	-
	Gabi3421g00001	1479	CDD	MYSc_Myo11	79	726	IPR036018	-
	Gabi3421g00001	1479	Pfam	DIL domain	1300	1402	IPR002710	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi3421g00001	Gabi-Chr3421	5031	26799	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi3421g00001	8	1476	Myosins gene family	AT5G43900	64.640	0.0	1971

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi3421g00001	K10357		-	jre:108980231	2148.63

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