Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3419g00047 ATGCATGGCATGGGAGGGATGGCACCCCCACCATCATCCACTAATGGCACCATGATGATGATGCACCATAAGATGATGATGCACATGACCTTCTATTGGGGGAAAGAGGCAGAGGTTCTGTTTAACAATTGGCCTGGGGACAGAACTGGCATGTACGTGTTGTCTTTGGTTTTTGTATTCGTGATGTCTGTTCTCGTCGAGGTACTTTCTCACACCCGGTTCATTAAACCCGGGTCGAACCATGTCGTGGCCGGTCTGGTTCAGACCCTGATGCATCTCCTCAGGGTTGGGCTTTCTAACTTGGTCATGCTAGCGCTCATGTCTTTCAATGGGGGAGTTTTCTTGGTTGCTGTGTTCGGTCACGCTCTGGGGTTCTTGTTTTTTAGCAGGGCTTTCAAAAAACCGCTCAAAGATGAGGGGTTTGATCTTCCTCCAATGACTTGTTAG 447 0.4899 MHGMGGMAPPPSSTNGTMMMMHHKMMMHMTFYWGKEAEVLFNNWPGDRTGMYVLSLVFVFVMSVLVEVLSHTRFIKPGSNHVVAGLVQTLMHLLRVGLSNLVMLALMSFNGGVFLVAVFGHALGFLFFSRAFKKPLKDEGFDLPPMTC 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3419g00047 148 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 18 135 IPR007274 GO:0005375|GO:0016020|GO:0035434
Gabi3419g00047 148 Pfam Ctr copper transporter family 29 73 IPR007274 GO:0005375|GO:0016020|GO:0035434
Gabi3419g00047 148 Pfam Ctr copper transporter family 82 128 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3419g00047 Gabi-Chr3419 517954 518414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3419g00047 30 148 Inorganic Solute Cotransporters AT5G59030 50.000 8.53e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3419g00047 K14686 - gmx:100306175 228.409