Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3419g00033 ATGGGTCTTCAAGACAGGAAACCATTCTTCTGCACTCTTATTACGTTAGCCCTTATTGCAATCACAAAACTCTTGCATTCTTACTTTTCCATACCTTTCCCTCCAACCTATCTTTCAATTGCTGGTGCCACCATCATCTTTGGTCTCATCCTATACTTGTTCTCCTCAAGTGCACATTCTAGCAAGCTCCCTCCATGTCCTTTCTCTGTCCCTATATTTGGCAATTGGTTGCAAGTTGGCAATGACCTCAATCACCGTCTTCTAGCTTCAATGTCACAAAACTATGGTCCCGTTTTCCTACTCAAACTTGGTTCCAAAAACTTGGTTGTGGTTTCCGATGCTGCTCTTGCCACCCAAGTCCTCCACTCACAAGGTGTTGAATTTGGTTCTCGCCCACGAAACGTTGTGTTTGATATCTTCACTGGAAATGGACAAGACATGGTGTTCACTGTGTACGGTGATCACTGGCGCAAAATGCGTAGAATAATGACTCTGCCATTTTTCACCACCAAGGTTGTTCAGAATTATAGTATCATGTGGGAAGAAGAGATGGACTTGGTAGTGCGTGACCTCAACAATAACGAAAAAGTGAGAAGCGAAGGGATAGTTATAAGAAAACGTCTTCAGCTTATGCTGTACAATATCATGTACAGGATGATGTTTGATGCTAAGTTTGAGTCTCAAGAGGACCCTTTGTTCATTGAGGCCACACGATTTAACTCTGAGAGAAGCCGTTTGGCACAGAGTTTCGAATATAATTACGGAGATTTTATACCATTGCTCAGGCCATTTTTGAGGGGTTACCTCAACAAGTGCAAGGACTTGCAAACTAGAAGGTTGGCATTTTTCAACACAAACTACGTTGAGAAAAGAAGAAAAATAATGGCTGCAAATGGGGAGAAGCATACGATAAGGTGTGCAATTGATCACATCATAGATGCTCAGATGAAGGGAGAAATCAGTGAAGAGAATGTGATATACATAGTAGAAAACATTAATGTTGCGGCAATAGAGACAACATTATGGTCCATGGAGTGGGCAATAGCAGAGTTGGTCAACCATCCAAACGTTCAAAGCAAGATTCGTGATGAGATATCAAAAGTGCTTAAAGGGGAGGCAGTTACAGAATCCAACCTACATGAACTACCATATTTACAAGCCACGGTGAAAGAGACATTAAGATTGCATACCCCAATTCCTCTGTTAGTGCCACACATGAACCTAGAAGAAGCAAAACTTGGAGGCTATACTATTCCAAAAGAGTCTAAGGTTATAGTGAATGCTTGGTGGCTTGCCAACAATCCAGCATGGTGGAAAAACCCAGAGGAATTCAGGCCAGAAAGGTTCTTGGAAGAGGAAAGTGAGACAGAAGCAGTTGCAGGAGGGAAGGTTGATTTTAGGTTCTTGCCATTTGGTGTTGGAAGAAGGAGTTGCCCTGGGATCATACTTGCATTACCAATACTTGGATTGGTGATAGCAAAGTTGGTGTCAAATTTTCAGCTGAATGCTCCACCAGGGACTAACATAGATGTGAGTGAAAAAGGAGGCCAATTTAGCTTGCACATTGCCAACCACTCCACTGTGTTGTTCCATCCAATTAGTAAATGA 1608 0.4223 MGLQDRKPFFCTLITLALIAITKLLHSYFSIPFPPTYLSIAGATIIFGLILYLFSSSAHSSKLPPCPFSVPIFGNWLQVGNDLNHRLLASMSQNYGPVFLLKLGSKNLVVVSDAALATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTTKVVQNYSIMWEEEMDLVVRDLNNNEKVRSEGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQTRRLAFFNTNYVEKRRKIMAANGEKHTIRCAIDHIIDAQMKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPNVQSKIRDEISKVLKGEAVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVIVNAWWLANNPAWWKNPEEFRPERFLEEESETEAVAGGKVDFRFLPFGVGRRSCPGIILALPILGLVIAKLVSNFQLNAPPGTNIDVSEKGGQFSLHIANHSTVLFHPISK 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3419g00033 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Gabi3419g00033 535 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS E-class P450 group I signature 116 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 51 533 - -
Gabi3419g00033 535 FunFam Trans-cinnamate 4-monooxygenase 54 527 - -
Gabi3419g00033 535 SUPERFAMILY Cytochrome P450 64 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 Gene3D Cytochrome P450 55 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3419g00033 535 Pfam Cytochrome P450 64 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3419g00033 Gabi-Chr3419 383446 385478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3419g00033 73 532 Monolignol Biosynthesis Gene Families AT2G30490 65.443 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3419g00033 K00487 - gmx:100812188 915.99