Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3419g00022 ATGGATGCGCAAGCCAAGAAAAAGGCATATTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAAAAACGCATAGAATCTCCCCTTGTTAGGTATAATGAATTTGATCAGCCCGTTTGCCGGGTTTGTGATGTTGCTCTGAAGTCTGAGTCTATATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAATCTTAAAGCTAATGCAGCTGGATCAACTCAGCAGAACATTGCTAAGCCTGTTACAGATACCATCTTTCTCAAAGCTAAACCAGAACAGCCTTCAGACTCACAATCCAAAATACCTGAATGTTCACGAGAAGTGCCTAAACCTCAGTCATCATCTATGCTTCCACCAGATTTTTTTGACAATAGTGATGCAAGAAAGACAAGATCTGAAAAGGACTCTTCCCATTTGGTGGACTCTGATTTAGGTAGAAAAATAGGGGTTTCTGTTCAAAGTCGGGTGTTAAATGTGGAAAAGGAGAAGGATCATTCTCATGGCAATGATGCTGCACAGTCAAAGGTTAGTCAAGCAACAATGGAGATTAGCCAGACAACAGTCAAGACTACTGATCCAGAGATCAAGCAAGTAAAAGGGGCTCTGCCTGAAGGCTTTTTTGATAATAAGGAAGCTGATTTGCGTGCACGTGGCATAAAGCCTGTTAAGCCAGATGTCAAGGACGAATACAGGGAATTTGAGAAGTTGATTCAAGAGGACTTGAAAGAGGTCGATGACCGGTTGGAAGAAGAAGAGATTGATGCTGCTGAAACGATAGAAGAAGCTGAATCTGTGGAGCAGAAGATCTTCAGGGAGAAAGTGGAAATGTTGAAGAAGAAGAGATTGGAGCGAAAGGCTGCTAACTCTGCAAAGCGCTGTAAATTGTCTGAGGTTGTAGCCAAGGAGTCTAGACGTGAAGAGTCATCCAGTGATGATGAAAGTGGTGAGAATTTTGCTGTGGACTGGAGAGCACAACACTTGTGA 993 0.428 MDAQAKKKAYFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVALKSESIWDAHQVSRKHREAISNLKANAAGSTQQNIAKPVTDTIFLKAKPEQPSDSQSKIPECSREVPKPQSSSMLPPDFFDNSDARKTRSEKDSSHLVDSDLGRKIGVSVQSRVLNVEKEKDHSHGNDAAQSKVSQATMEISQTTVKTTDPEIKQVKGALPEGFFDNKEADLRARGIKPVKPDVKDEYREFEKLIQEDLKEVDDRLEEEEIDAAETIEEAESVEQKIFREKVEMLKKKRLERKAANSAKRCKLSEVVAKESRREESSSDDESGENFAVDWRAQHL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3419g00022 330 PANTHER UNCHARACTERIZED 1 330 IPR040050 GO:0003676|GO:0005681|GO:0008270
Gabi3419g00022 330 MobiDBLite consensus disorder prediction 94 123 - -
Gabi3419g00022 330 MobiDBLite consensus disorder prediction 174 194 - -
Gabi3419g00022 330 MobiDBLite consensus disorder prediction 164 194 - -
Gabi3419g00022 330 MobiDBLite consensus disorder prediction 93 145 - -
Gabi3419g00022 330 Coils Coil 237 271 - -
Gabi3419g00022 330 MobiDBLite consensus disorder prediction 127 145 - -
Gabi3419g00022 330 MobiDBLite consensus disorder prediction 301 322 - -
Gabi3419g00022 330 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Gabi3419g00022 330 Pfam Zinc-finger of C2H2 type 39 61 - -
Gabi3419g00022 330 Gene3D Classic Zinc Finger 32 70 - -
Gabi3419g00022 330 MobiDBLite consensus disorder prediction 301 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3419g00022 Gabi-Chr3419 289185 294649 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3419g00022 1 330 C2H2 Transcription Factor Family AT3G02860 51.176 7.83e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3419g00022 K13104 - gmx:100802710 473.011