Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3417g00030 ATGCCGATGTTTGTAAATCAGACTCTATTTGCATTCGCTACTCCAATCGAATCAAACCATTCTGCAGCATATAATGTTTGCATTGATATTCCGCCCCATATTGTCTCAGATGGTTTTTGGGGAGGACACCAAACAGAAGGGTCACCATTAAAGTCTTCTTTTCCAGTATTCATGCTTCAAATCATTGTAATCTATGCTGTTACACAGCCTATCCATTTCCTTCTTAAGAAGTTTGGTTTACCTGTGTTCATTTCTCAAATGATGGCTGGGATACTTATAGGACCATCGTTGAATGTATTTGAGCAATACAAGATGATGCTGTTTCCTTTTGGAAGTCAGGATACACTAGCAACAATAACATCACTTGGTTATGTACTGTTCATGTTTGAGAATGGTGTGAAAATGGATATTGGCATGATATTCAGGACAGGAAAGAAGGGATGGGTCATTGGTTTTTTAGGGTTGGCAACACCTCTGATAGTTGGTTATGCATCTTACAACTTCGTGACAAAAAATGTGGGGGCAACTTTTGGATCCAAAAAAAATGCATTCGGTGTTGTATTGATAACACAGAGTATAACTTCATTTGCAGTGATTGCTTCGGTGCTGAATGAACTTCAAATACTAAACTCTGAACTTGGGAGACTCACATTATCTAGTTCATTGGTGGGTGACTTATTAAGTAACATTATTTTGGGTATTGGCTCAATCGTTGATAAATCACCCAACAGTAAGGTAGTTGGCATAAGTTTGGGAGCTACAATTGCCTTGATTATAGTCATTTTCTTTGTCTACCGTCCTGCAATGTATTGGGTGATTGAACACACACCAGAAGGCAAAGAAGTGGATGATATTTACATTAATATTATCATTGGGATTCTCTTTACTTTAGGTGCCTTTTCAATGCTCATGAATCTTGAATTTTTCTTTCTACCTTTTCTTTTTGGATTGGCTACACCAGAAGGACCTCCATTAGGATCTACATTGGTTAAAAGGATTCAACTCTTTGGCTCAGAATTGTTTTTGCCAATCTACTTTACTATCTGTGGAATTAAGGTAGATCTTTCTGATTTTGTTTCGTTTCTTCCAACTGTTGCCCCGATTGTTCTTCTGGGTCATCTAATCAAAATGGGAACATGCATGGCATCTGCACTCTATTTCATGGTGCCTTTTAATGATGCTCTCTGTCTGAGCCTTCTTATGAACTACAAAGGTGTTCAGGAAATTAGCATGTACAACGCTGCACTTGATAAAAATGATCTCCACAGCCAAACTTATACAACAATGATTACGATAGTCATGGTAATAAGCAGCATTTTATACGTGTTGGTGAAACGTTTCTATGATCCTTCCAGGAAATATGCTGGCTACCAGAATAGAAACATTCTAAGTGTAAAGCCCAACTCATATTTTCGGATACTAGTTTGCATTCACAAACAGCACCAAACAATTCCTATTATCAGAACCCTTGATCTATGTTATCCAACAGAAGAAGATCCTATAGTCGTGGAAGCATTGCATCTAATCGAACTAGTTGGTCTTTCCTCACCCATTTTCATTTCTCACAAGCTGAAGAATGGTGAAGTGCGTAGCTCTTACTCTGAGAATGTCATTCTTGCTTTCAAACTCTACGAAGGTGATAAACCAGGTGCAGTATCAGCAAACCCTTACACAGCCATATCCCCACGTAACTTCATGCATGAAGATGTTTGCAACCTTGCATTGGACAAAGTTGCATCTTTTATTATTCTTCCCTTTCATAGAAAATTGACCAATGATGGCAACATTAAATATGATGACAAGAATGTGAGGGCTCTAAACTGTATGGTACTTGAAAGGGCTCCATGTTCAGTTGGAATCTTAGTGAGTCGTGCTGTAATTCATCATGAAGAAAGAGATTCATCTCTTGAGTTAGCAATGATATTTTTGGGTGGGAATGATGATAGAGAGGCTTTGTGTTTAGCCTATAGAGCAGCAAGGGACCCTACCGTTAACCTTGTGGTGTATCACATTGTAGCAGAGAACAACGACGGAATACCAGACTTGGATACTATGATTGATATAGGAATGTTGAAAGATGCTAAGAACGAACGTATGGGAAATGTGAATTATAGAGAAATACAAGTGGAGGGTGGTATCCAAACAGTTTCAATGCTACGTCAAATTGTGAATGTGCACGACTTTATTATAGTTGGGAGAAGACATGGCATTGACTCTCTTCAAACAAGAGGGCTTCAAGAATGGAGTGAGTTTTCAGAATTGGGTCTAATTGGAGATTTTCTTGCTTCCGCGGATCTTGAATGCAATTCATCTGTTTTGGTCGTGCAGCAGCAACAACAACACATTTAG 2349 0.3861 MPMFVNQTLFAFATPIESNHSAAYNVCIDIPPHIVSDGFWGGHQTEGSPLKSSFPVFMLQIIVIYAVTQPIHFLLKKFGLPVFISQMMAGILIGPSLNVFEQYKMMLFPFGSQDTLATITSLGYVLFMFENGVKMDIGMIFRTGKKGWVIGFLGLATPLIVGYASYNFVTKNVGATFGSKKNAFGVVLITQSITSFAVIASVLNELQILNSELGRLTLSSSLVGDLLSNIILGIGSIVDKSPNSKVVGISLGATIALIIVIFFVYRPAMYWVIEHTPEGKEVDDIYINIIIGILFTLGAFSMLMNLEFFFLPFLFGLATPEGPPLGSTLVKRIQLFGSELFLPIYFTICGIKVDLSDFVSFLPTVAPIVLLGHLIKMGTCMASALYFMVPFNDALCLSLLMNYKGVQEISMYNAALDKNDLHSQTYTTMITIVMVISSILYVLVKRFYDPSRKYAGYQNRNILSVKPNSYFRILVCIHKQHQTIPIIRTLDLCYPTEEDPIVVEALHLIELVGLSSPIFISHKLKNGEVRSSYSENVILAFKLYEGDKPGAVSANPYTAISPRNFMHEDVCNLALDKVASFIILPFHRKLTNDGNIKYDDKNVRALNCMVLERAPCSVGILVSRAVIHHEERDSSLELAMIFLGGNDDREALCLAYRAARDPTVNLVVYHIVAENNDGIPDLDTMIDIGMLKDAKNERMGNVNYREIQVEGGIQTVSMLRQIVNVHDFIIVGRRHGIDSLQTRGLQEWSEFSELGLIGDFLASADLECNSSVLVVQQQQQHI 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3417g00030 782 Pfam Sodium/hydrogen exchanger family 62 439 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi3417g00030 782 PANTHER CATION/H + ANTIPORTER 36 780 - -
Gabi3417g00030 782 Gene3D - 56 454 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3417g00030 Gabi-Chr3417 466977 470931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3417g00030 26 782 Antiporter Super Family AT5G22900 34.530 1.03e-150 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3417g00030 K26731 - gmx:100784321 801.971