Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3417g00023 | ATGGCTTTGAAGGGGCATGATCTGATAGGAATCGCAGAAACAGGATCAGGGAAGACACTTGCGTACCTGTTGCCTTCCATAGTGCATGTAAATGCTCAGCCAATTCTAGATCCTGGAGATGGACCAATTGTGTTAGTTTTGGCTCCAACTCGGGAACTTGCTGTCCTCATACAACAAGAGGCTACTAAATTTGGTTCATCGTCAAAGATTAAGAGTACCTGCATCTGTGGTGGGGTTCCAAAGGGACCTCAGGTGCATGATCTCCAGAAAGGTGTTGAAATTGTAATTGCCACTCTGGGAAGGTTAATTGATATGCTCGAGTCAAATCATACTAATTTGCAGAGGGTCACATACCTTGTATTGGATGAAGCTGATAGGATGTTGGACATGGGGTTTGATCCTCAGATACGGAAGATTTTGTCTCTCAGGAAATGGTATGTGAAGGATGCGAAATATGTGATAAATTATGACTTCCCGGGATCAGAGGACTATGTTCATTGCATTGGGAGGACTAGAAGTGCTGGTGCAAAAGGAATTGCGTACACATTCTTCACAGCTGCTAATGCCAGATTTGCAATGGGATGCGGTGCACAACGTCCGCCTTCAGGTCACCGAGGTTTCCAAGACCGTGGGAGGGGTTATATGGCAGTGCTCGTCCATGGAGCTGATTGA | 672 | 0.4583 | MALKGHDLIGIAETGSGKTLAYLLPSIVHVNAQPILDPGDGPIVLVLAPTRELAVLIQQEATKFGSSSKIKSTCICGGVPKGPQVHDLQKGVEIVIATLGRLIDMLESNHTNLQRVTYLVLDEADRMLDMGFDPQIRKILSLRKWYVKDAKYVINYDFPGSEDYVHCIGRTRSAGAKGIAYTFFTAANARFAMGCGAQRPPSGHRGFQDRGRGYMAVLVHGAD | 223 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3417g00023 | 223 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 147 | 189 | - | - | |
Gabi3417g00023 | 223 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 2 | 147 | IPR027417 | - | |
Gabi3417g00023 | 223 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1 | 140 | IPR014001 | - | |
Gabi3417g00023 | 223 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 147 | 191 | IPR027417 | - | |
Gabi3417g00023 | 223 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 120 | 128 | IPR000629 | - | |
Gabi3417g00023 | 223 | Gene3D | - | 150 | 199 | IPR027417 | - | |
Gabi3417g00023 | 223 | Gene3D | - | 1 | 149 | IPR027417 | - | |
Gabi3417g00023 | 223 | Pfam | DEAD/DEAH box helicase | 2 | 142 | IPR011545 | GO:0003676|GO:0005524 | |
Gabi3417g00023 | 223 | SMART | ultradead3 | 1 | 164 | IPR014001 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3417g00023 | Gabi-Chr3417 | 362409 | 363929 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3417g00023 | 3 | 136 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 32.593 | 1.60e-16 | 75.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3417g00023 | K12823 | - | gmx:100790464 | 257.299 |