Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3417g00022 | ATGTCTTCTTCCTCCTCTCCCAAAAAGTACGATGTATTCATTAGCTTCAGAGGTGAGGATACACGAACCAATTTCACTAGCCATCTTCATAATGCTCTCTGCCGCGAAAACATCGAAACATACATTGATTATGAGCTTGAAAAGGGAGATGAGGTTTGGACTGCACTTGAAAAAGCAATCAAGGACTCAAGTATATCCATCATCGTTTTCTCAGAAAACTATGCTACATCAAAATGGTGCTTGGAAGAACTCGTCAAAATACTCGAGTGCAGAAAATATCATGGACAGGTAGTTATACCTGTTTTCTATGAAACAGATCCATCACATGTACGTAAACAGAAGGGAAGTTACGAGAAAGCATTTGCCAAACATGAGAGAGATTTCACGAATAGTGGATCTAACCAAGACAAAGTGTCTGAGTGGAAAGCTGCACTCGCTGAAGCCGCCAATATATCTGGATGGGACTCTGACTCTCGTACCCATAGGGATGATTCTGAATTCATCCAAAACATTGTGAACGATGTTTGGCAAAAGCTGTCCCTGATGTATCCTAATGAACTGAAAGGCCTTGTTGAAATTGATGAGAGCACTAAATCCATTGAATCATTACTCGATCAAGTTCCAAGAATTGGTATTTGGGGCATGGGCGGTATAGGTAAGACAACCATAGCTAGACACATGTTTGCCAAACACTTTTCACAATATGACAGTGCATGCTTCCTGGCAAATGTAAGAGAAGAATCAGAGAAGTTCGGACTAACATTTACACGTGATAAGCTTCTCTCTGAGTTACTAAAGAAACCAATTACAACATCTCATGTCACTGGATCCACATTCATTAAGAGGAGGGTCAGTAGTAAAAAAGTTTTCATTGTACTTGATGATGTTGATAGTTCTTCTCAACTAGAAGAATTATTGTGTGGACAACTAGATGACCTTGGCCCAGACAGTAGACTCATTATTACTACGAGAAATAGGCATATGCTTAGTGGAAGAGTTGATGTGATATATGACGTCACGCAATGGAAGTTTCCAGAATCTTTAAAGCTTTTTAGCTTAGCAGCCTTCAAGGAAAACCAACCTAAAGAAGGTTATGAGGATCTTTCAGAAAGAGCAGTTGCATGTGCAGGAGGCGTTCCTTTAGCTTTAAAAGTATTGGGTTCACATTTTCATTCCAGAGATACTGAATTTTGGAAATGTGAATTGAATAAATTTGAGAGCAAGAGGGAATCCTTTAAGGAAATTCAAAACGTGTTACATGTGAGCTATAATGGATTATCAGAGCTAAACCAGGCAATATTTCTGGACATTGCATTCTTTTTCAAAGATAGAAATAAAGATTACGTCATAAGCATACTAGATGCGTGTGGTTTCTTCGCTACCAGTGGAATACAAGTCCTTGAAGACAAAGCCCTTGTAACTATTTCACGGGGCAATAGAATACAAATGCATGACTTGCTACAGGAAATGGGTTTGGATATAGTTCGGAGAGACCCAGGAGGACGTAGCCGACTGAGGGATATTGGAGATGTTCGTGATGTACTTAACAATAACAAGGGAACTAATGCAGTTGAAGGCATGGCAATAGATTTGTCTCAAAGAGTAGATTTACGCATAAGTGCCGACACATTCAGCATGATGACCCGTTTAAGATTTCTTCAATTATATGTCCCCTGGGGTGAGGAGAGTTCTGCTGTCGTGAACCTTCCTCCAGCTCTTTTGCCATTTTCGGATAAATTGAGGTACCTTGAGTGGTATGGATATCCTTTGAAGTCTCTTCCATCACCTTTTCGTGCTGAGCTGCTTGTTGAGATTCGCTTGCCGCACAGCAATATTGAGTATCTTTGGGACGGCATGCAGGTGCGTGAACTTGTGAATTTAGAGCTAATGGACCTAACTGAATGCAAACAGTTGATGAAGCTCCCGAATTTGTCTGGCGCGTCCAAACTCGAATATCTGGAACTCACCAATTGTGCAAGTTTATGCGATGTTCACCCATCTGTTTTTTTTAACGACACACTTGTTACTTTGCTACTTGATGGATGCAAAAAACTGGAAAGTCTAATATGTGAGAAGCATTTGAGATCTCTAGAGGATATCAGTGTTAGTGGCTGCTCAAGTCTGAAGGAATTTTCATTGTCCTCGGACTTAATTGAAAACTTGGATTTAAGCGATACAGCAATCGAAAGATTGTACCCATCAATCGGTCGTCTAAGAATGCTTGAGGAGCTCGATCTAGAAGGTTTAAGACTTGAGAATCTTCCAAATGAGTTGTCTTTCCTACAATTGATTACGAAGCTTTGGATTTCAAGCAGCGACATAGTGACTAAACAGAAGTTACATGTACTGTTTGATGGTTTGCGATCTTTAAAAAAACTATATTTGAAAGAATGTTGTAACTTATCTGAACTCCCAGACAACATCAGTGGGTTAGCATCATTAGAGGAATTGAGACTAGATAGAAGCAGTGTGGAGACGTTGCCTGAAAGCATCAAGGACCTCTCAAATCTAAAAATTCTGTCCTTAGAGAATTGCAGGAAGCTTCAATGTCTGCCAGAGCTTCCTCAGAATATAAAGTTGTTTAATGCAGATAACTGCACATCATTGGTGAGAGTATCCACTTTAAAGACTTCTTCAGAAACAATGTATGTAAAGAAGAAATGCTTTTGTTTCAAGAATGCTATGCAATTGGATGGACCTTCACTCGACTGCATTGTTGAAGATGCTCTATTAACAATGAAGAGTGCTTCACGTGGTAATATATCCCTAGACGAAGACAGTTGGAAAATCATCTTCTACAATTATAACTCTACTGAGGTTTGTTTACCAGGAAGCAGAGTCCCAGAGCAGTTCAAATACCGAACAACACATTCCTCCATAACTGTTGGAATTGCTGGCGGCTTGGGATTGATTTTTTCGGCAGTTGTTTCTGCGTCCTATGGAATGGAGAAGGACTATAATGGTGCTAAAATCGAATGTCAATGCTACTCGGAAGATGGCAGAAAGGTGGGATATGCATCAAGGCCTTATTATATAAAAGTTTTCGATTTGAACTGTGATCATATTTATGTATGGTATGATGCAAGCCATTCTCTGCACATTCTCCGCAACGGTGAATCAAAGGTTTGTTTTGAATTCAGTGTTAGAACTGATATTGGGGAGCGCCATGGCTTGTTCCGTGTGAAAGAATGTGGGGTCCTTCCTGTGTACTTGGAAAGGGTGGACTCGGAAATGGAAATTGAGTCAGAAACAATTGACGGATTTGATGAGAGGAAAGGCAAAGGAGTAGAATCTGTTGAAAAAGAGACACACAATCAGTTAAGAAAGAGACGCAAAATCAGTTGA | 3345 | 0.4 | MSSSSSPKKYDVFISFRGEDTRTNFTSHLHNALCRENIETYIDYELEKGDEVWTALEKAIKDSSISIIVFSENYATSKWCLEELVKILECRKYHGQVVIPVFYETDPSHVRKQKGSYEKAFAKHERDFTNSGSNQDKVSEWKAALAEAANISGWDSDSRTHRDDSEFIQNIVNDVWQKLSLMYPNELKGLVEIDESTKSIESLLDQVPRIGIWGMGGIGKTTIARHMFAKHFSQYDSACFLANVREESEKFGLTFTRDKLLSELLKKPITTSHVTGSTFIKRRVSSKKVFIVLDDVDSSSQLEELLCGQLDDLGPDSRLIITTRNRHMLSGRVDVIYDVTQWKFPESLKLFSLAAFKENQPKEGYEDLSERAVACAGGVPLALKVLGSHFHSRDTEFWKCELNKFESKRESFKEIQNVLHVSYNGLSELNQAIFLDIAFFFKDRNKDYVISILDACGFFATSGIQVLEDKALVTISRGNRIQMHDLLQEMGLDIVRRDPGGRSRLRDIGDVRDVLNNNKGTNAVEGMAIDLSQRVDLRISADTFSMMTRLRFLQLYVPWGEESSAVVNLPPALLPFSDKLRYLEWYGYPLKSLPSPFRAELLVEIRLPHSNIEYLWDGMQVRELVNLELMDLTECKQLMKLPNLSGASKLEYLELTNCASLCDVHPSVFFNDTLVTLLLDGCKKLESLICEKHLRSLEDISVSGCSSLKEFSLSSDLIENLDLSDTAIERLYPSIGRLRMLEELDLEGLRLENLPNELSFLQLITKLWISSSDIVTKQKLHVLFDGLRSLKKLYLKECCNLSELPDNISGLASLEELRLDRSSVETLPESIKDLSNLKILSLENCRKLQCLPELPQNIKLFNADNCTSLVRVSTLKTSSETMYVKKKCFCFKNAMQLDGPSLDCIVEDALLTMKSASRGNISLDEDSWKIIFYNYNSTEVCLPGSRVPEQFKYRTTHSSITVGIAGGLGLIFSAVVSASYGMEKDYNGAKIECQCYSEDGRKVGYASRPYYIKVFDLNCDHIYVWYDASHSLHILRNGESKVCFEFSVRTDIGERHGLFRVKECGVLPVYLERVDSEMEIESETIDGFDERKGKGVESVEKETHNQLRKRRKIS | 1114 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3417g00022 | 1114 | Gene3D | - | 181 | 335 | IPR027417 | - | |
Gabi3417g00022 | 1114 | Gene3D | Ribonuclease Inhibitor | 528 | 716 | IPR032675 | - | |
Gabi3417g00022 | 1114 | Gene3D | Ribonuclease Inhibitor | 717 | 884 | IPR032675 | - | |
Gabi3417g00022 | 1114 | Gene3D | - | 344 | 427 | IPR042197 | - | |
Gabi3417g00022 | 1114 | MobiDBLite | consensus disorder prediction | 1091 | 1107 | - | - | |
Gabi3417g00022 | 1114 | ProSiteProfiles | TIR domain profile. | 8 | 179 | IPR000157 | GO:0007165 | |
Gabi3417g00022 | 1114 | Pfam | Leucine Rich Repeat | 602 | 618 | IPR011713 | - | |
Gabi3417g00022 | 1114 | MobiDBLite | consensus disorder prediction | 1091 | 1114 | - | - | |
Gabi3417g00022 | 1114 | Pfam | TIR domain | 9 | 189 | IPR000157 | GO:0007165 | |
Gabi3417g00022 | 1114 | SMART | till_3 | 9 | 151 | IPR000157 | GO:0007165 | |
Gabi3417g00022 | 1114 | SUPERFAMILY | L domain-like | 529 | 869 | - | - | |
Gabi3417g00022 | 1114 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 182 | 437 | IPR027417 | - | |
Gabi3417g00022 | 1114 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 10 | 714 | IPR044974 | GO:0006952 | |
Gabi3417g00022 | 1114 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 6 | 181 | - | - | |
Gabi3417g00022 | 1114 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 2 | 154 | IPR035897 | - | |
Gabi3417g00022 | 1114 | SUPERFAMILY | "Winged helix" DNA-binding domain | 413 | 498 | IPR036390 | - | |
Gabi3417g00022 | 1114 | Pfam | NB-ARC domain | 209 | 423 | IPR002182 | GO:0043531 | |
Gabi3417g00022 | 1114 | Gene3D | - | 7 | 180 | IPR035897 | - | |
Gabi3417g00022 | 1114 | PRINTS | Disease resistance protein signature | 209 | 224 | - | - | |
Gabi3417g00022 | 1114 | PRINTS | Disease resistance protein signature | 376 | 390 | - | - | |
Gabi3417g00022 | 1114 | PRINTS | Disease resistance protein signature | 283 | 297 | - | - | |
Gabi3417g00022 | 1114 | PRINTS | Disease resistance protein signature | 832 | 848 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3417g00022 | Gabi-Chr3417 | 362198 | 370815 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3417g00022 | 5 | 847 | WRKY Transcription Factor Family | AT4G12020 | 34.375 | 7.55e-107 | 367 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3417g00022 | - | - | psat:127076353 | 1236.86 |