Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3417g00022 ATGTCTTCTTCCTCCTCTCCCAAAAAGTACGATGTATTCATTAGCTTCAGAGGTGAGGATACACGAACCAATTTCACTAGCCATCTTCATAATGCTCTCTGCCGCGAAAACATCGAAACATACATTGATTATGAGCTTGAAAAGGGAGATGAGGTTTGGACTGCACTTGAAAAAGCAATCAAGGACTCAAGTATATCCATCATCGTTTTCTCAGAAAACTATGCTACATCAAAATGGTGCTTGGAAGAACTCGTCAAAATACTCGAGTGCAGAAAATATCATGGACAGGTAGTTATACCTGTTTTCTATGAAACAGATCCATCACATGTACGTAAACAGAAGGGAAGTTACGAGAAAGCATTTGCCAAACATGAGAGAGATTTCACGAATAGTGGATCTAACCAAGACAAAGTGTCTGAGTGGAAAGCTGCACTCGCTGAAGCCGCCAATATATCTGGATGGGACTCTGACTCTCGTACCCATAGGGATGATTCTGAATTCATCCAAAACATTGTGAACGATGTTTGGCAAAAGCTGTCCCTGATGTATCCTAATGAACTGAAAGGCCTTGTTGAAATTGATGAGAGCACTAAATCCATTGAATCATTACTCGATCAAGTTCCAAGAATTGGTATTTGGGGCATGGGCGGTATAGGTAAGACAACCATAGCTAGACACATGTTTGCCAAACACTTTTCACAATATGACAGTGCATGCTTCCTGGCAAATGTAAGAGAAGAATCAGAGAAGTTCGGACTAACATTTACACGTGATAAGCTTCTCTCTGAGTTACTAAAGAAACCAATTACAACATCTCATGTCACTGGATCCACATTCATTAAGAGGAGGGTCAGTAGTAAAAAAGTTTTCATTGTACTTGATGATGTTGATAGTTCTTCTCAACTAGAAGAATTATTGTGTGGACAACTAGATGACCTTGGCCCAGACAGTAGACTCATTATTACTACGAGAAATAGGCATATGCTTAGTGGAAGAGTTGATGTGATATATGACGTCACGCAATGGAAGTTTCCAGAATCTTTAAAGCTTTTTAGCTTAGCAGCCTTCAAGGAAAACCAACCTAAAGAAGGTTATGAGGATCTTTCAGAAAGAGCAGTTGCATGTGCAGGAGGCGTTCCTTTAGCTTTAAAAGTATTGGGTTCACATTTTCATTCCAGAGATACTGAATTTTGGAAATGTGAATTGAATAAATTTGAGAGCAAGAGGGAATCCTTTAAGGAAATTCAAAACGTGTTACATGTGAGCTATAATGGATTATCAGAGCTAAACCAGGCAATATTTCTGGACATTGCATTCTTTTTCAAAGATAGAAATAAAGATTACGTCATAAGCATACTAGATGCGTGTGGTTTCTTCGCTACCAGTGGAATACAAGTCCTTGAAGACAAAGCCCTTGTAACTATTTCACGGGGCAATAGAATACAAATGCATGACTTGCTACAGGAAATGGGTTTGGATATAGTTCGGAGAGACCCAGGAGGACGTAGCCGACTGAGGGATATTGGAGATGTTCGTGATGTACTTAACAATAACAAGGGAACTAATGCAGTTGAAGGCATGGCAATAGATTTGTCTCAAAGAGTAGATTTACGCATAAGTGCCGACACATTCAGCATGATGACCCGTTTAAGATTTCTTCAATTATATGTCCCCTGGGGTGAGGAGAGTTCTGCTGTCGTGAACCTTCCTCCAGCTCTTTTGCCATTTTCGGATAAATTGAGGTACCTTGAGTGGTATGGATATCCTTTGAAGTCTCTTCCATCACCTTTTCGTGCTGAGCTGCTTGTTGAGATTCGCTTGCCGCACAGCAATATTGAGTATCTTTGGGACGGCATGCAGGTGCGTGAACTTGTGAATTTAGAGCTAATGGACCTAACTGAATGCAAACAGTTGATGAAGCTCCCGAATTTGTCTGGCGCGTCCAAACTCGAATATCTGGAACTCACCAATTGTGCAAGTTTATGCGATGTTCACCCATCTGTTTTTTTTAACGACACACTTGTTACTTTGCTACTTGATGGATGCAAAAAACTGGAAAGTCTAATATGTGAGAAGCATTTGAGATCTCTAGAGGATATCAGTGTTAGTGGCTGCTCAAGTCTGAAGGAATTTTCATTGTCCTCGGACTTAATTGAAAACTTGGATTTAAGCGATACAGCAATCGAAAGATTGTACCCATCAATCGGTCGTCTAAGAATGCTTGAGGAGCTCGATCTAGAAGGTTTAAGACTTGAGAATCTTCCAAATGAGTTGTCTTTCCTACAATTGATTACGAAGCTTTGGATTTCAAGCAGCGACATAGTGACTAAACAGAAGTTACATGTACTGTTTGATGGTTTGCGATCTTTAAAAAAACTATATTTGAAAGAATGTTGTAACTTATCTGAACTCCCAGACAACATCAGTGGGTTAGCATCATTAGAGGAATTGAGACTAGATAGAAGCAGTGTGGAGACGTTGCCTGAAAGCATCAAGGACCTCTCAAATCTAAAAATTCTGTCCTTAGAGAATTGCAGGAAGCTTCAATGTCTGCCAGAGCTTCCTCAGAATATAAAGTTGTTTAATGCAGATAACTGCACATCATTGGTGAGAGTATCCACTTTAAAGACTTCTTCAGAAACAATGTATGTAAAGAAGAAATGCTTTTGTTTCAAGAATGCTATGCAATTGGATGGACCTTCACTCGACTGCATTGTTGAAGATGCTCTATTAACAATGAAGAGTGCTTCACGTGGTAATATATCCCTAGACGAAGACAGTTGGAAAATCATCTTCTACAATTATAACTCTACTGAGGTTTGTTTACCAGGAAGCAGAGTCCCAGAGCAGTTCAAATACCGAACAACACATTCCTCCATAACTGTTGGAATTGCTGGCGGCTTGGGATTGATTTTTTCGGCAGTTGTTTCTGCGTCCTATGGAATGGAGAAGGACTATAATGGTGCTAAAATCGAATGTCAATGCTACTCGGAAGATGGCAGAAAGGTGGGATATGCATCAAGGCCTTATTATATAAAAGTTTTCGATTTGAACTGTGATCATATTTATGTATGGTATGATGCAAGCCATTCTCTGCACATTCTCCGCAACGGTGAATCAAAGGTTTGTTTTGAATTCAGTGTTAGAACTGATATTGGGGAGCGCCATGGCTTGTTCCGTGTGAAAGAATGTGGGGTCCTTCCTGTGTACTTGGAAAGGGTGGACTCGGAAATGGAAATTGAGTCAGAAACAATTGACGGATTTGATGAGAGGAAAGGCAAAGGAGTAGAATCTGTTGAAAAAGAGACACACAATCAGTTAAGAAAGAGACGCAAAATCAGTTGA 3345 0.4 MSSSSSPKKYDVFISFRGEDTRTNFTSHLHNALCRENIETYIDYELEKGDEVWTALEKAIKDSSISIIVFSENYATSKWCLEELVKILECRKYHGQVVIPVFYETDPSHVRKQKGSYEKAFAKHERDFTNSGSNQDKVSEWKAALAEAANISGWDSDSRTHRDDSEFIQNIVNDVWQKLSLMYPNELKGLVEIDESTKSIESLLDQVPRIGIWGMGGIGKTTIARHMFAKHFSQYDSACFLANVREESEKFGLTFTRDKLLSELLKKPITTSHVTGSTFIKRRVSSKKVFIVLDDVDSSSQLEELLCGQLDDLGPDSRLIITTRNRHMLSGRVDVIYDVTQWKFPESLKLFSLAAFKENQPKEGYEDLSERAVACAGGVPLALKVLGSHFHSRDTEFWKCELNKFESKRESFKEIQNVLHVSYNGLSELNQAIFLDIAFFFKDRNKDYVISILDACGFFATSGIQVLEDKALVTISRGNRIQMHDLLQEMGLDIVRRDPGGRSRLRDIGDVRDVLNNNKGTNAVEGMAIDLSQRVDLRISADTFSMMTRLRFLQLYVPWGEESSAVVNLPPALLPFSDKLRYLEWYGYPLKSLPSPFRAELLVEIRLPHSNIEYLWDGMQVRELVNLELMDLTECKQLMKLPNLSGASKLEYLELTNCASLCDVHPSVFFNDTLVTLLLDGCKKLESLICEKHLRSLEDISVSGCSSLKEFSLSSDLIENLDLSDTAIERLYPSIGRLRMLEELDLEGLRLENLPNELSFLQLITKLWISSSDIVTKQKLHVLFDGLRSLKKLYLKECCNLSELPDNISGLASLEELRLDRSSVETLPESIKDLSNLKILSLENCRKLQCLPELPQNIKLFNADNCTSLVRVSTLKTSSETMYVKKKCFCFKNAMQLDGPSLDCIVEDALLTMKSASRGNISLDEDSWKIIFYNYNSTEVCLPGSRVPEQFKYRTTHSSITVGIAGGLGLIFSAVVSASYGMEKDYNGAKIECQCYSEDGRKVGYASRPYYIKVFDLNCDHIYVWYDASHSLHILRNGESKVCFEFSVRTDIGERHGLFRVKECGVLPVYLERVDSEMEIESETIDGFDERKGKGVESVEKETHNQLRKRRKIS 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3417g00022 1114 Gene3D - 181 335 IPR027417 -
Gabi3417g00022 1114 Gene3D Ribonuclease Inhibitor 528 716 IPR032675 -
Gabi3417g00022 1114 Gene3D Ribonuclease Inhibitor 717 884 IPR032675 -
Gabi3417g00022 1114 Gene3D - 344 427 IPR042197 -
Gabi3417g00022 1114 MobiDBLite consensus disorder prediction 1091 1107 - -
Gabi3417g00022 1114 ProSiteProfiles TIR domain profile. 8 179 IPR000157 GO:0007165
Gabi3417g00022 1114 Pfam Leucine Rich Repeat 602 618 IPR011713 -
Gabi3417g00022 1114 MobiDBLite consensus disorder prediction 1091 1114 - -
Gabi3417g00022 1114 Pfam TIR domain 9 189 IPR000157 GO:0007165
Gabi3417g00022 1114 SMART till_3 9 151 IPR000157 GO:0007165
Gabi3417g00022 1114 SUPERFAMILY L domain-like 529 869 - -
Gabi3417g00022 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 437 IPR027417 -
Gabi3417g00022 1114 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 714 IPR044974 GO:0006952
Gabi3417g00022 1114 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 181 - -
Gabi3417g00022 1114 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 154 IPR035897 -
Gabi3417g00022 1114 SUPERFAMILY "Winged helix" DNA-binding domain 413 498 IPR036390 -
Gabi3417g00022 1114 Pfam NB-ARC domain 209 423 IPR002182 GO:0043531
Gabi3417g00022 1114 Gene3D - 7 180 IPR035897 -
Gabi3417g00022 1114 PRINTS Disease resistance protein signature 209 224 - -
Gabi3417g00022 1114 PRINTS Disease resistance protein signature 376 390 - -
Gabi3417g00022 1114 PRINTS Disease resistance protein signature 283 297 - -
Gabi3417g00022 1114 PRINTS Disease resistance protein signature 832 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3417g00022 Gabi-Chr3417 362198 370815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3417g00022 5 847 WRKY Transcription Factor Family AT4G12020 34.375 7.55e-107 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3417g00022 - - psat:127076353 1236.86