Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3417g00016 ATGGATAGTATTTGGATTGTGTTTGTGACAGCATTATTTCTCTTGTGTACTATGATCCTTTGCAAGAACAGGCCTAGACTTATGCTCAAGTCAAAACATAGAAATCAGCTTCCATTAGGCACTCTTGGATGGCCTTTTATTGGTGAAACCATTGAGTTTGTTTCTTGTGCTTACTCTGATCGCCCTGAGACTTTCATGGACAAACGACGCAGCTTGTATGGCATGGTGTTTAAGTCACACATATTTGGAAGCCCCACAATTGTTTCAACTGATGCAGATGTGAATAAATTTATACTGCAAAGTGATGCAAAGGTTTTCGTTCCTTCTTATCCCAAGTCTCTCACGGAGTTGATGGGGGAGTCTTCTATTTTGCTCATCAATGGAAGCTTACAGAAGAGAATACATGGACTCATTGGAGCTTTCTTCAAGTCTCAACAGCTAAAGGCTCAGATCACCAGAGATATGCAGAAGAATGTTCAAGAATCAATGGCAAATTGGAGGGAGGACAACCCTATATACATACAAGATGAAACAAAAAGGATTGCCTTTCATGTACTAGTCAAGGCATTGATTAGTTTGGAACCAGGTGAAGAAATGGAACTTCTAAAGAAACATTTTCAGGAATTTATCTCTGGCCTAATGTCTTTACCCATAAACCTACCAGGAACTAAACTTTATCAATCTTTACAGGCAAAAAAGAAAATGGTGAAAATAGTTCGGAGAATTATCCAAGATAGAAGAAATAGTGACAACTCCAAAGTTCCAAAAGATGTAGTGGATGTGCTTCTTAATGATGCAAGTGAGAAATTGACTAATGATTTAATAGCAGATAATATTATTGATATGATGATTCCAGGGGAGGACTCAGTGCCCGTTCTTATGACTCTAGCTACAAAGTACCTATCAGAATGTCCTGCTGCTTTGCAACAATTAACAGAGGAAAATATGAAGCTTGCCAAACTCAAAAATCAGCTTGGGGAGCCCTTGTGTTGGAGCGATTACTTATCATTGCCATTTACTCAAACAGTTATCACAGAAACTTTGAGAATGGGAAATATTATAATTGGCGTTATGAGAAAGGCCATAAAAGATGTTGAAATAAAAGGGTATTTAATACCACAAGGGTGGTGTGTATTTGTAAATTTTAGATCAGTTCATCTAGATGACAAAAACTATGAGAGTCCATATCAATTCAATCCATGGAGGTGGCAAGACAAAGACATGAGCAATTGCAATTTCACTCCTTTTGGAGGGGGACAAAGGCTGTGCCCTGGCCTTGACTTGGCTAGGCTTGAAGCTTCCATCTTCCTACACCACTTAGTTACTCAATTCAGATGGTATGCTGAAGGAGATACTATAGTGAACTTCCCCACTGTAAGAATGAAAAGGAGGATGCCTATATTAGTAAGGAGGGTGTAA 1419 0.3869 MDSIWIVFVTALFLLCTMILCKNRPRLMLKSKHRNQLPLGTLGWPFIGETIEFVSCAYSDRPETFMDKRRSLYGMVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLTELMGESSILLINGSLQKRIHGLIGAFFKSQQLKAQITRDMQKNVQESMANWREDNPIYIQDETKRIAFHVLVKALISLEPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKIVRRIIQDRRNSDNSKVPKDVVDVLLNDASEKLTNDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPAALQQLTEENMKLAKLKNQLGEPLCWSDYLSLPFTQTVITETLRMGNIIIGVMRKAIKDVEIKGYLIPQGWCVFVNFRSVHLDDKNYESPYQFNPWRWQDKDMSNCNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAEGDTIVNFPTVRMKRRMPILVRRV 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3417g00016 472 CDD CYP90-like 69 471 - -
Gabi3417g00016 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Gabi3417g00016 472 SUPERFAMILY Cytochrome P450 32 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3417g00016 472 Pfam Cytochrome P450 38 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3417g00016 472 Gene3D Cytochrome P450 28 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3417g00016 472 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3417g00016 472 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3417g00016 472 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3417g00016 472 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3417g00016 472 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3417g00016 472 PANTHER CYTOCHROME P450 26 34 447 - -
Gabi3417g00016 472 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 28 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3417g00016 Gabi-Chr3417 349681 354654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3417g00016 33 445 Cytochrome P450 AT3G13730 69.139 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3417g00016 K12638 - gmx:100797868 831.247