Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3416g00046 ATGTCTTCCAAACCCTTCAGGCCTTGCTCTTTGGACGTACTTATATATGTCCTTGCACCACATTATTATAATGCAGAAGAACTGGGTATGATTGAGAGTTTCCAAGAACAGCAACACCAACTACTGCATCTCCAACATGAAGAAGAGGCCAGTACGTCAAAGTCAAAGCCAAAGCCAAAGCCAGAGAAAGAAATAACGGTGACCCCAAAAAGGCAGCGCAAAATGCATGACGAGGAGGAAAGGCCCACTCCCTCATGGGCCTCGTCAGTGAATAAAAAACCAAGAAACACAAAGAATGCAGCACCACCATCTTCATCTTCATCTTCATCTTCATCTTCATCTTCATCGCCGCAGTCACCACTGCCACCGTCACCACCGTCGTCACCATCGCCACCGCCACCAGTACCAGCACCACCATCTTCATCTTCATCTTCATCTTCATCGCCGCTGCCACCACCGGTTCTGCCTGATGAATTCAAGAACCGTATGAGAGAGTTAAACGGCAGCGACGTGCAATTTGTGATGAGGAAGAATCTCTCCAAGACAGATCTGAGCGCGAATCACAACCGTCTATCAATGCCGATGAAAGAAATACGTTGCGATTTCCTGACTGAGGCTGAGAAGGCAACATTGCAAGAGAGAGAAAGCTGTAAAGGAAGACTTCGGGGTGTTGAAGTGAAGGTGTTGGATCCATCTCTCAGGGAATATACTTTGATACTGAAGAGGTGGGAGATGACGAGCACGAGCATCTACTGTCTCATCAAAGACTGGAAAATCGTTCTCTCTCATAACAGTTTGCAAGAAGGAGACCAACTTCAAATATGGAGTTCTAGAGTGGATG 841 0.4673 MSSKPFRPCSLDVLIYVLAPHYYNAEELGMIESFQEQQHQLLHLQHEEEASTSKSKPKPKPEKEITVTPKRQRKMHDEEERPTPSWASSVNKKPRNTKNAAPPSSSSSSSSSSSSSPQSPLPPSPPSSPSPPPPVPAPPSSSSSSSSSPLPPPVLPDEFKNRMRELNGSDVQFVMRKNLSKTDLSANHNRLSMPMKEIRCDFLTEAEKATLQERESCKGRLRGVEVKVLDPSLREYTLILKRWEMTSTSIYCLIKDWKIVLSHNSLQEGDQLQIWSSRVD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3416g00046 280 CDD B3_DNA 177 280 IPR003340 GO:0003677
Gabi3416g00046 280 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 48 278 IPR005508 GO:0003677
Gabi3416g00046 280 Pfam B3 domain-containing protein At2g31720-like 160 261 IPR005508 GO:0003677
Gabi3416g00046 280 MobiDBLite consensus disorder prediction 84 117 - -
Gabi3416g00046 280 Gene3D - 166 280 IPR015300 -
Gabi3416g00046 280 SUPERFAMILY DNA-binding pseudobarrel domain 175 277 IPR015300 -
Gabi3416g00046 280 MobiDBLite consensus disorder prediction 45 159 - -
Gabi3416g00046 280 MobiDBLite consensus disorder prediction 118 156 - -
Gabi3416g00046 280 MobiDBLite consensus disorder prediction 45 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3416g00046 Gabi-Chr3416 541665 542505 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3416g00046 163 280 B3 DNA Binding Superfamily AT1G05930 30.833 9.18e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3416g00046 - - gmx:102663833 143.28