Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3416g00044 ATGGCGACACCAGCATTGGAGCAGGTTCAATGTTTCGGTCGCAAGAAGACGGCAGTTGCAGTGACATACTGCAAGCGAGGTCGTGGTCTGATCAAGATCAACGGCTGTCCAATCGAGCTAGTTGAACCGGAGATCCTCCGGTTCAAGGCGTTCGAGCCGATTCTCCTCCTCGGGAGGCACCGGTTCGCCGGCGTGGACATGCGGATCCGCGTGAAGGGAGGAGGACACACCTCGCAGATCTACGCCATCCGTCAGAGCATAGCGAAGGCACTGGTTGCATTCTACCAAAAGTACGTGGATGAGCAGAGCAAGAAGGAGATCAAGGATATCCTCGTCAGGTACGACCGCACACTCCTTGTGGCTGATCCCAGGCGCTGTGAGCCCAAGAAGTTCGGTGGTCGTGGTGCTCGTGCTAGGTTTCAGAAGTCTTATCGTTAA 438 0.5571 MATPALEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3416g00044 145 SUPERFAMILY Ribosomal protein S5 domain 2-like 8 145 IPR020568 -
Gabi3416g00044 145 PANTHER RIBOSOMAL PROTEIN S9 7 142 IPR000754 GO:0003735|GO:0005840|GO:0006412
Gabi3416g00044 145 FunFam 40S ribosomal protein S16 1 145 - -
Gabi3416g00044 145 ProSitePatterns Ribosomal protein S9 signature. 73 91 IPR020574 GO:0003735|GO:0005840|GO:0006412
Gabi3416g00044 145 Gene3D - 2 145 IPR014721 -
Gabi3416g00044 145 Pfam Ribosomal protein S9/S16 13 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3416g00044 Gabi-Chr3416 498539 499157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3416g00044 1 145 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 89.041 7.56e-95 268