Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3416g00042 ATGGTGGAGCAGAATCTTGTACCAAAGGAAAGGAATAAAGATTGGATTAGAGCTCTTATGAATAGCAGCTTTGGTTACTGTGATGATCACCATGACCTTCGATCTAATGAGAAGAATGTGTTCTGCGTAGACTGTGGGGTTAGATTGTGTAGGCACTGTAAGGAAGCTCATTCCCTCCATAGAAGGTTTCAGATTTACAAATATTCCTCTCAGGATGTCTTCCGCCACTCCGAGCTGCAGAAGTATTTTGACTGCACCAAAATTCAGACTTACGTATCCAATAATGAAAGGATTGTGCATCTCAAACCCCGGCCTTCAACCATTAAATCTAAATCTGCTGATCTAAGCCCTGAGTCTAAATCCAAAGAAACCAACATATCAACAAGACCAAAGTCGGGTGGTACGTGTGAACAATGTGGAAAACACATTCAAGATGATCGTAATCGCTTCTGCTCCATTACATGCAAGATCTCAGTGCTTCCAGTGGAGCCCCAAAACCAAACTCAAATTCACCATTCACAAAGGAGTTCAGCAGAGCCTGTCAACCAAAGTGCTAGATGCATCATCACTCCAAAACCTGAACCTATTGACTTCAATATGAATGACAACCATAATTCAGAAGCGGAGTCATCTATCTCTGAAGCTGAGCCATATGGGTGTGTTGAAGTTGTGAATTTCAGAAAGCGCCCAAGGAAAACTACCCCTCAGAGGCCTATCTTTGTTTACATATCTTAA 735 0.4204 MVEQNLVPKERNKDWIRALMNSSFGYCDDHHDLRSNEKNVFCVDCGVRLCRHCKEAHSLHRRFQIYKYSSQDVFRHSELQKYFDCTKIQTYVSNNERIVHLKPRPSTIKSKSADLSPESKSKETNISTRPKSGGTCEQCGKHIQDDRNRFCSITCKISVLPVEPQNQTQIHHSQRSSAEPVNQSARCIITPKPEPIDFNMNDNHNSEAESSISEAEPYGCVEVVNFRKRPRKTTPQRPIFVYIS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3416g00042 244 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 11 237 - -
Gabi3416g00042 244 SUPERFAMILY B-box zinc-binding domain 17 66 - -
Gabi3416g00042 244 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Gabi3416g00042 244 Pfam PLATZ transcription factor 67 157 IPR006734 -
Gabi3416g00042 244 MobiDBLite consensus disorder prediction 109 134 - -
Gabi3416g00042 244 SMART bboxneu5 22 65 IPR000315 GO:0008270
Gabi3416g00042 244 MobiDBLite consensus disorder prediction 102 138 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gabi3416g00042 PLATZ 2.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3416g00042 - - gmx:100815813 383.645