Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3416g00037 ATGTCTTCCAAACCCTTCAGGCCTTGCTCTTTGGACGTACTTATATATGTCCTTGCACCACATTATTATAATGCAGAAGAACTGGGTATGATTGAGAGTTTCCAAGAACAGCAACACCAACTACTGCATCTCCAACATGAAGAAGAGGCCAGTACGTCAAAGTCAAAGCCAAAGCCAAAGCCAGAGAAAGAAATAACGGTGACCCCAAAAAGGCAGCGCAAAATGCATGACGAGGAGGAAAGGCCCACTCCCTCATGGGCCTCGTCAGTGAATAAAAAACCAAGAAACACAAAGAATGCAGCACCACCATCTTCATCTTCATCTTCATCTTCATCTTCATCTTCATCGCCGCAGTCACCACTGCCACCGTCACCACCGTCGTCACCATCGCCACCGCCACCAGTACCAGCACCACCATCTTCATCTTCATCTTCATCTTCATCGCCGCTGCCACCACCGGTTCTGCCTGATGAATTCAAGAACCGTATGAGAGAGTTAAACGGCAGCGACGTGCAATTTGTGATGAGGAAGAATCTCTCCAAGACAGATCTGAGCGCGAATCACAACCGTCTATCAATGCCGATGAAAGAAATACGTTGCGATTTCCTGACTGAGGCTGAGAAGGCAACATTGCAAGAGAGAGAAAGCTGTAAAGGAAGACTTCGGGGTGTTGAAGTGAAGGTGTTGGATCCATCTCTCAGGGAATATACTTTGATACTGAAGAGGTGGGAGATGACGAGCACGAGCATCTACTGTCTCATCAAAGACTGGAAAATCGTTCTCTCTCATAACAGTTTGCAAGAAGGAGACCAACTTCAAATATGGTCTTTCAGAGTGGATGGCAAATTATTTTTTGTATTAAATAAACTCTGA 873 0.457 MSSKPFRPCSLDVLIYVLAPHYYNAEELGMIESFQEQQHQLLHLQHEEEASTSKSKPKPKPEKEITVTPKRQRKMHDEEERPTPSWASSVNKKPRNTKNAAPPSSSSSSSSSSSSSPQSPLPPSPPSSPSPPPPVPAPPSSSSSSSSSPLPPPVLPDEFKNRMRELNGSDVQFVMRKNLSKTDLSANHNRLSMPMKEIRCDFLTEAEKATLQERESCKGRLRGVEVKVLDPSLREYTLILKRWEMTSTSIYCLIKDWKIVLSHNSLQEGDQLQIWSFRVDGKLFFVLNKL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3416g00037 290 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 48 290 IPR005508 GO:0003677
Gabi3416g00037 290 CDD B3_DNA 177 289 IPR003340 GO:0003677
Gabi3416g00037 290 MobiDBLite consensus disorder prediction 84 117 - -
Gabi3416g00037 290 Pfam B3 domain-containing protein At2g31720-like 160 261 IPR005508 GO:0003677
Gabi3416g00037 290 MobiDBLite consensus disorder prediction 45 159 - -
Gabi3416g00037 290 MobiDBLite consensus disorder prediction 118 156 - -
Gabi3416g00037 290 MobiDBLite consensus disorder prediction 45 83 - -
Gabi3416g00037 290 SUPERFAMILY DNA-binding pseudobarrel domain 175 288 IPR015300 -
Gabi3416g00037 290 Gene3D - 154 290 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3416g00037 Gabi-Chr3416 438978 439850 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3416g00037 163 289 B3 DNA Binding Superfamily AT1G05930 31.783 4.01e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3416g00037 - - gmx:102666575 158.688