Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3416g00013 ATGGGAAGTGTTATGACAGAAAAAGTGAAGCTTATAGTGGCATTACTTGCTCTGCAGTTTTGCTTTGCAGGATTTCACATTGTCTCTAGACTTGCACTGAACATTGGTGTGAGCAAAGTCGTTTACCCTGTTTATAGAAATATAATCGCCGTGCTTATGTTGAGCCCGCTTGCTTATTTCTTAGAGAAGAATCAAAGACCACCCCTTACTTTTTCTTTACTGTTTCAATTCTTCCTATTAGCATTGCTGGGCATCACTGCAAACCAAGGGTTTTACTTGTTGGGATTATATTATGCTTCTCCAACTTTTGCTTCTGCAATGCAAAACTCGGTTCCTGCCATCACTTTTGTCATGGCCTCAGCTCTAAGACTTGAGGAAGTCAACATGGCAAGGAGAGATGGAGTGACAAAAGTTCTAGGAACCATTGCCTGTGTTGGGGGTGCCACTATAATAACTCTCTATAAAGGCCCTCCTCTTCTTCACCTGCAGACGCACAAAATACTACAAGGAGACACCTTGGACGTAGCTCAGTCTTCAACAAAAATACAAAACTGGATATGGGGTTGCATATTCTTGCTTGGACATTGTTTATCATGGGCTGGCTGGATGGTTTTTCAGACTCCTGTTGTGAAGAAGTATCCAGCAAAACTATCACTCACTTCGTTTACATGCTTCTTTGGATTGATTCAATTCTTGATTATAGCAGCCTTTGTAGAAACTGACATAGAGAGTTGGAAGATACAATCCGCAGAGGAGCTTTTTACCATCCTATATGCTGGAGTTGTAGCATCCGGCATTGTCATCTCTCTCCAAACATGGTGTATTCAAAAGGGTGGCCCTGTATTTGTTGCTGTCTTCCAGCCCTTGCAAACCTTTCTAGTTGCTATTATGGCAGCCATAATTCTTGGTGATCAGTTATACTCTGGAGGGGTTATTGGTGCAATTCTTATCGTGCTTGGTCTCTACCTAGTCCTTTGGGGCAAAACCCAGGAAAAAAAGGTGATTGACACAGAGAAGGCATCATTGATAAAGTCCTTACTCAATGCTGAGAAAGAGAATAAAGAAGCTGATACTGCTCGTAAAGACATACCTTGA 1095 0.4183 MGSVMTEKVKLIVALLALQFCFAGFHIVSRLALNIGVSKVVYPVYRNIIAVLMLSPLAYFLEKNQRPPLTFSLLFQFFLLALLGITANQGFYLLGLYYASPTFASAMQNSVPAITFVMASALRLEEVNMARRDGVTKVLGTIACVGGATIITLYKGPPLLHLQTHKILQGDTLDVAQSSTKIQNWIWGCIFLLGHCLSWAGWMVFQTPVVKKYPAKLSLTSFTCFFGLIQFLIIAAFVETDIESWKIQSAEELFTILYAGVVASGIVISLQTWCIQKGGPVFVAVFQPLQTFLVAIMAAIILGDQLYSGGVIGAILIVLGLYLVLWGKTQEKKVIDTEKASLIKSLLNAEKENKEADTARKDIP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3416g00013 364 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Gabi3416g00013 364 Pfam EamA-like transporter family 12 152 IPR000620 GO:0016020
Gabi3416g00013 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 154 - -
Gabi3416g00013 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 330 - -
Gabi3416g00013 364 PANTHER WAT1-RELATED PROTEIN 12 338 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3416g00013 Gabi-Chr3416 135920 137795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3416g00013 4 357 Nodulin-like Gene Family AT3G18200 66.209 1.51e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3416g00013 - - mtr:11414658 580.867