Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3414g00015 ATGGGCTTTTTCCGGCGACTCTTCGGCGGAAAGAAGCACCGTACTCCTCCATCCGGAGCTTCTGACGGGTCGGGTTCCAAACCCGGCAAGGACAAAAGGAGTTGGAGCTTCGTTAAACACAGCACCAGGGACAAGTCCAACTCATTATCAAACCTCAACCACGACCTTGACCTCTCCACCGACTCCTTGGACGCCAATAAGCATGCCATCGCCGTCGCTGCCGCAACCGCCGCCGTAGCAGAGGCCGCACTCGCCGCCGCTCACGCCGCCGCAGAGGTGGTCAGACTAACCAGCGGCAATAGCAGCAGGGCCGCCACCGCGGCTCAAGTCCATCGTCAGTTGGCGGAGGAAGCCGCAGCCGCCGCCGTGAAGATACAATCGGCGTTCCGAGGTTACTTGGCAAGGAGGGCACTGAGAGCACTTAGAGCATTGGTGAAGTTGCAAGCATTAGTGAGGGGCCACATTGTAAGAAAGAAAACTGCAGATATGCTCAAGCGCATGCAAACATTGGTGCGACTGCAGGCCCGGGCACGTGCAAGTCGTGTGGACTTGTCAGATAATATGCATTCTTTCAAGTCTTCACTTTCTCATTTCCCTGTCCCTGAAGATTATGAGCCCCCATTCCGTTCCTATAGTACCAAATTTGATGGATCTTCTATCCTCAAGAGATGTAGTTCCAATGCAAATTTCAGGGATATTGACTTAGAAAGAGCCCGGTTTGATTCCAATTGGTTAGAGAGTTGGATGGAAGAAAGTGTGTGCAACCAAACTGGTGATGCTTCATTGAAAAATGGGCACCCTAATGATGATAAGGGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTGAACACCCACCATAGTAGCAGCTCATTTCAGACAGCACATCATTACTTGTCTTCTGATTACAATAATGAGAATTTTATGGCATATAAGTCTCCATCAAAACGTTCTTCAAAAGTTCAAAATCCGTGTCTCTCTTCTAGGGAAGTGTTACCACTAGGCTCTCTGAAGTTCTACAAAGGAAAAGAAGAAGTGGTTTCAAGAACTGTTGAGAATAGTCCACAAGCATTTTCTGCCTCCTCTAGACTTGGAAGTGGTGGAAGGAGAGGTCCTTTTACACCCACTAAGAGTGAGTGTTCGTGGGGTTTCTTCAGTGGCTACTCGGGTCATCCCAATTACATGGCAAATACTGAATCTTTTAGAGCTAAGGTTAGGTCACATAGTGCTCCAAGGCAAAGGGTGGAGTTTGAGAGATATGGTGGTTCAACTAGAAGGTCTCTTCAGGGACTTTGTGATGCAGGGCCTAATTCAGATGGGTATTCTGATTTCAGGAGCAATGCCTATCCAACCACAAGCTGCTTGAACATAATTGGGAGCAGCAATTTAAGGTGA 1401 0.4839 MGFFRRLFGGKKHRTPPSGASDGSGSKPGKDKRSWSFVKHSTRDKSNSLSNLNHDLDLSTDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGNSSRAATAAQVHRQLAEEAAAAAVKIQSAFRGYLARRALRALRALVKLQALVRGHIVRKKTADMLKRMQTLVRLQARARASRVDLSDNMHSFKSSLSHFPVPEDYEPPFRSYSTKFDGSSILKRCSSNANFRDIDLERARFDSNWLESWMEESVCNQTGDASLKNGHPNDDKGDKILEVDTWKPHLNTHHSSSSFQTAHHYLSSDYNNENFMAYKSPSKRSSKVQNPCLSSREVLPLGSLKFYKGKEEVVSRTVENSPQAFSASSRLGSGGRRGPFTPTKSECSWGFFSGYSGHPNYMANTESFRAKVRSHSAPRQRVEFERYGGSTRRSLQGLCDAGPNSDGYSDFRSNAYPTTSCLNIIGSSNLR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3414g00015 466 MobiDBLite consensus disorder prediction 1 53 - -
Gabi3414g00015 466 Pfam Protein of unknown function (DUF4005) 356 430 IPR025064 -
Gabi3414g00015 466 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Gabi3414g00015 466 SMART iq_5 140 161 IPR000048 GO:0005515
Gabi3414g00015 466 SMART iq_5 117 139 IPR000048 GO:0005515
Gabi3414g00015 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 163 IPR027417 -
Gabi3414g00015 466 PANTHER IQ-DOMAIN 5-RELATED 3 429 - -
Gabi3414g00015 466 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Gabi3414g00015 466 Pfam IQ calmodulin-binding motif 142 159 IPR000048 GO:0005515
Gabi3414g00015 466 Pfam IQ calmodulin-binding motif 120 139 IPR000048 GO:0005515
Gabi3414g00015 466 MobiDBLite consensus disorder prediction 354 373 - -
Gabi3414g00015 466 Gene3D - 115 169 - -
Gabi3414g00015 466 MobiDBLite consensus disorder prediction 26 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3414g00015 Gabi-Chr3414 187877 194045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3414g00015 1 432 IQD Protein Family AT5G62070 46.413 3.07e-65 214