Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3411g00001 ATGCCGTCGGAACCAATACCGTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAGTCTCTAGGGTCTGTGGCCAGATGGAGAGACACTCCAGCTCATCACGGCTCCCGCGAGTTGAATCGGTGGGGATCAGCCGAAAATCGGCGCTCATCTGGTCATGGCAAGCTGGGTGGTTGGCACCTGTTTCCAGAAGATTCCGGTAATGGGCATGGGCTTTCTCGGTCCTGTGATAAGATGCTGGAGGAAAATAATTGTCGGCCTTCAGTTTCTCGAGGGGATGGAAAGTATGGCAGGAACAATAGGGAAAACAGAGGATCCTTTAGCCAGAGAGATTGGAGAGGACATTCATCGGAAACTGCTAACAGCTCTCTGAATTTGTCCAGGAGGCAACTGGATGCGAATAATGACCAGAGATCAGTTGATGACATACTCACATATTCTTCTCATCCGCATTCCGACTTTGTGAACTCTTGGGAGCAGCATCACTTGAAAGACCAGCATGAAAAGATGGGTGGTGCCAATGGTTTGGGTACGGGCCAGAGATCTGACAGGGAGAGTTTGGGTTCGATTGCATGGAAGCCACTTAAATGGAACCGTTCTGGAAGCTTGTCTTCTCTAGGCTCAGGCTTTAGCCACTCAAGTAGGAGCGCCAGAGGGGCAGATTCCTGTGAAGGGAAGGTTGAGTTGAAGGACAAAAATGCAACTGCTGTTGAGTCAAATTCTGGGGAAGCTTCTGCGTATGAGACTTCTTCTGCTCCTCTGGCTAAATTGGGGAAGAAGCCTAGGCTAAATTGGGGTGAGGGACTTGCAAAGTATGAGAAAAAGAAAGTCGAGGGGCCTGATGTAAGTGCAAACAAAGATGGCGCTGTCTTCTCTACTATCAACAATTTCCCCAGTCCCATCTTAGTAGATAAAAGCCCGAAAGATACAGGATTTTCAGATTCTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTTGCAAGGTGTGGATGATAAATTATTTGGAAAAGCTTCAAATGTGGACAATGATGCTAGTAATTTGAGTGGTTCACCTCGTCCTGTGTCTCAAAATCATATGCAGAGGTTTCCTTTCAATTTAGAGAAGGTGGATATTGACTCGTTGACAAGTCTGGGTTCTTCACTTTTTGAGTTGCTACAGTCTGATGATTTGAGCTCTGTGGATTATAGTCTAGTGATATCCCCTGCAATGAATAAGTTGCTGGCATGGAAAGCTGACATTTCAAAGGTATTGGAGGTGACTGAAACTGAAATTGATTTACTTGAAAATGAACTGAAGTCACTAAAATCTGAATCTGGGGATAGATTTCCGTACTCAGCAGCAGTTGGGTCCCTGCTGGTATACTTCAATGAAAAATCTTGTGATGAACATGTTGGAGGCTCTGTCAAGGTTGCTCGTCCAGAGTCATTGCAAATTGTTTCTTCTGATGACCCTAATGTGGAGATGCTTCATTCTACTAACTTGCATGATATACATGATAATGGCAAGGAAGATGATATTGACAGTCCTGGAACGGCAACGTCTAAATTTGTAGAGCCTCTGCCCTTGATTAATGCAGTTTCTTCATGTGATGTGGGGAGATATAATACTTGCTCTGGAGCCTTGGATGGAATTCAGTCTACTGCCATGAAATGCTTACTTCCCTGTGCGTATAGACAAGTTGCTACTGTATCTGCTTGTGGTGATGGTAATACATCTATGGAGGTAAAAGATGGCGTGGGTGGTAACTCTGGCGCAAGCTTTTGTTCTAGCACTGAGGATATTTTATGTGCTAAAATTATTTCTGCCAATAAAGAATATGCAAAGAGTGCATCTGAGGTATTTACTAAGTTATTGCCAAAAGAATGTGATAAGATGGCTAATATTGGAGCTAGCTGCAGCTCATGCTCACATGATAGTGCATTCATTGTGGAAAAATTTGCAAAGAAAAAGCTGTTTGCAAGATTTAAGGAGAGAGTTATAACACTTAAGTTTAAAGCCTTGCATTACCTGTGGAAAGAAGATATGCGCTTACTATCTATAAGGAAATGCCGCCCAAAATCTCACAAAAAACTTGAAATAGGTTTGCGAACTATCAGTTGTGTTCGTCAAAAGAATCGATCCTCCATTCGTTCTCGTTTTCCCTTCTCAGAAGGAAATCAACTAAGCTTGGTTCCAACATCTGAGATGATTAATTATACAAGGCAACTGCTTTCAGAATCCCAAGATAAAGTTCACAGAAACTGCTTGAAGATGCCAGCACTAATTTTGGATCAGAAGGAGAAAATGATTTCAAAGTTTATATCTAGCAATGGGCTGGTTGAAGATCCTTTGGCTATTGAGAGAGAAAGGGCTATGATCAACCCATGGACTTCAGAAGAGAGAGATATTTTCATGGAGAAATTTGCAGCCTTTGGAAAGGATTTTCGGAGAATTGCTTCTTTCCTTGACCACAAAACAACTGCTGATTGTGTTGAATTCTACTACAAAAACCACAAGTCCGATTGTTTTGAGAAAATTAAGGTGCAAGATGGTGGTGTTAAGCTAGGGAAGTTGTTTACTGCCAAAACTGACTTGATGGCATCAGGTAAAAAATGGAATTATCAAGTGAATGCTGCTTCTCTTGAGATTTTGAGTGCAGCTTCAGTGATGGCAGATGGCATTGCGGGTAACCAAAACATGCATTCAGGAAGTTCACTTTTAAGGGGATATGGTTGTTTGAAAACATCAAGGGATGAGGATAGCATCACGAAGAGATCAAGTGGTTTTGACATTCTTCAAGAGGAAAGGGAGACTGTCGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTAAGGCTATGAGTTCGTGCAGAACAAGTTCATTTCATAACACGAACAGGAAGCGTTTGAAGTTGAGGCCTCTATGCAAACAACCTATGACGCCTGATGTTACTCAAAATATTGATGATGAAACTTGTTCTGATGAGGGCTGTGGTGAAATGGATCCTTCTAATTGGACAGACGAGGAGAAGGCAACCTTTCTTCAGGCTGTATCATCATTTGGAAAGGATTTTGCGATGATTGCACAAAGTGTAGGAACAAGGTCCCAAGATCAGTGCAAAGCTTTTTTCAGTAAGGCTCGGAAATGCCTTGGCTTGGACCTCATGCACCCTAGACCTGAAAATGTTGGATCACCAGTGAATAATGATACAAGTGGTGGCAGGAGTGACACAGAGGATGCATGCATTGTGGAGATAGGTTCAGTCATTGGCACTGATAAGTCAGGCACTAAAACAGATGAGGAACTCCCTTCGCCTGGCATGAACACATACTGTGATGAATCCAATCCTGTGGAAGCCAGGAACTTGTCAGCTGACTTAAATGAATCAAAGGAGATATATGGGGAAGAAGTAGATCGTGAAGTTGTAAATATGGTTTCCGATGCATGTGTAATTAAGTGCGAGTCTAAACTGGGCTCTGATGATAGCGGGGTTGTGTTGTACAGTTCTGATAAGTCTGGTTTTGTTGGGGACCAGGGAGCTATAATTATGTCAGATAACTTACAAGCTGGAAAAGATAAACCAAATGAAGTGGGAGGTGCCGTTACAGAATTGTTGTCTGCTTCAGAATTAATTGAACCGTGCCACTCTAATCCTGTTGCTGAGGTTTTTACTGGTGGTTCTGGAAACAAATTGGAGGGGTCAACTCCATGCGTTGATGGTAGAGATGATAAACATGAAGCTGATACAGATGTTGGAGTTGAATTGAAAAACTCAGTCCATGATTCAAGATTGAGTTTTGGTGCTAAAAATCAGCTGCAACTGTCCCATAAGTCTTATTTCTTAGGATCCTCTGTAGATGATCCTCATGCAACTGCAAATTCAATGTTGCAAAATACTGCCGGTGCTTCTGTTCAATGTGTGAAAAAAACTATCCTAGATCGAGTGTCTTCTACTTGTGATTTTCCGGGAAGTAGAGATAAGAATAGTCATAATTCCATCAGCGATGGAGGCTATCAGCTTCTTAAGCATGGGAATTTATTGGACCATGTTGAGGCTGCTAGAATCCTTCAGTGCTATCCTTTCCAAGTGCCTGTTAAGAAAGAAGTGAATGGAGATATGAGCTGCAGCAATTCAGCAACTGTGTTCCCTATTCTGTCACAAAAGATTGAACAAGCTGATGGTAATTACAAAACACAGTTGCGGTGTTCGTCAGATTCAGAAAAAACTTCCAGAAATGGTGATGTGAAACTGTTTGGGAAGATATTATCCAATCCTTCGTCCACCCAGAAGCCTAATTTAACTGCCAAGAGAAATGAAGAAAATGGTACCCATCATCTGAAGTTAAGCCGCAACTCTTCTAATATGAAATTTGCTGGCCATTATAATGCTGACAAAAAATCAGCTATTTTGAAGTTTGATCATAATGATTATAGGGGCCTTGAAAATGTTCCTTTGAGTTATGGTTATCGGGATGGGAACAGAATACCGACTAGTTTCTCATCACTACCTGATTCTGCCCTCTTCCTTGCCAAATATCCTGCAGCATTCAGTAATTATCCTACATCTTCTGCCAAATTAGAGCAACATTCATTGCAGGCATTGGCCAAAAATAATGAACAGCACCTGAATGGAGTATCTGCTTTTACAACTAGAGAAGTCAATGGCAGCAATGGTGTGATTGATTATCAGATGTTTAGAAATAGGGATGGTCTGAAAGTGCAGCCATTTATGGTAGATGTAAAGCATCGACAAGATATGTTCTCTGAGATACAGAGAAGAAATTTTGAAGCTATCTCAAGTTTACAGGGAATGGTGGGAATGAATGGTGTTGGGAGACCAGGTATTGTTGTTGGAGGATCACGGAGTGGAGTCTCAGATCCTGTGGCAGCCATCAAAATGCATTATTCAAATTCTGATCAGTGTGGCAGTCAGAATGGGAGTATAATGAGAGAGGATGAATCTTGGGGTGGAAAAGGGGATTTAGGCAGGTAG 5001 0.4223 MPSEPIPWDRKDFFKERKHERSESLGSVARWRDTPAHHGSRELNRWGSAENRRSSGHGKLGGWHLFPEDSGNGHGLSRSCDKMLEENNCRPSVSRGDGKYGRNNRENRGSFSQRDWRGHSSETANSSLNLSRRQLDANNDQRSVDDILTYSSHPHSDFVNSWEQHHLKDQHEKMGGANGLGTGQRSDRESLGSIAWKPLKWNRSGSLSSLGSGFSHSSRSARGADSCEGKVELKDKNATAVESNSGEASAYETSSAPLAKLGKKPRLNWGEGLAKYEKKKVEGPDVSANKDGAVFSTINNFPSPILVDKSPKDTGFSDSASPATPSSVACSSLQGVDDKLFGKASNVDNDASNLSGSPRPVSQNHMQRFPFNLEKVDIDSLTSLGSSLFELLQSDDLSSVDYSLVISPAMNKLLAWKADISKVLEVTETEIDLLENELKSLKSESGDRFPYSAAVGSLLVYFNEKSCDEHVGGSVKVARPESLQIVSSDDPNVEMLHSTNLHDIHDNGKEDDIDSPGTATSKFVEPLPLINAVSSCDVGRYNTCSGALDGIQSTAMKCLLPCAYRQVATVSACGDGNTSMEVKDGVGGNSGASFCSSTEDILCAKIISANKEYAKSASEVFTKLLPKECDKMANIGASCSSCSHDSAFIVEKFAKKKLFARFKERVITLKFKALHYLWKEDMRLLSIRKCRPKSHKKLEIGLRTISCVRQKNRSSIRSRFPFSEGNQLSLVPTSEMINYTRQLLSESQDKVHRNCLKMPALILDQKEKMISKFISSNGLVEDPLAIERERAMINPWTSEERDIFMEKFAAFGKDFRRIASFLDHKTTADCVEFYYKNHKSDCFEKIKVQDGGVKLGKLFTAKTDLMASGKKWNYQVNAASLEILSAASVMADGIAGNQNMHSGSSLLRGYGCLKTSRDEDSITKRSSGFDILQEERETVAADVLAGICGSLSSKAMSSCRTSSFHNTNRKRLKLRPLCKQPMTPDVTQNIDDETCSDEGCGEMDPSNWTDEEKATFLQAVSSFGKDFAMIAQSVGTRSQDQCKAFFSKARKCLGLDLMHPRPENVGSPVNNDTSGGRSDTEDACIVEIGSVIGTDKSGTKTDEELPSPGMNTYCDESNPVEARNLSADLNESKEIYGEEVDREVVNMVSDACVIKCESKLGSDDSGVVLYSSDKSGFVGDQGAIIMSDNLQAGKDKPNEVGGAVTELLSASELIEPCHSNPVAEVFTGGSGNKLEGSTPCVDGRDDKHEADTDVGVELKNSVHDSRLSFGAKNQLQLSHKSYFLGSSVDDPHATANSMLQNTAGASVQCVKKTILDRVSSTCDFPGSRDKNSHNSISDGGYQLLKHGNLLDHVEAARILQCYPFQVPVKKEVNGDMSCSNSATVFPILSQKIEQADGNYKTQLRCSSDSEKTSRNGDVKLFGKILSNPSSTQKPNLTAKRNEENGTHHLKLSRNSSNMKFAGHYNADKKSAILKFDHNDYRGLENVPLSYGYRDGNRIPTSFSSLPDSALFLAKYPAAFSNYPTSSAKLEQHSLQALAKNNEQHLNGVSAFTTREVNGSNGVIDYQMFRNRDGLKVQPFMVDVKHRQDMFSEIQRRNFEAISSLQGMVGMNGVGRPGIVVGGSRSGVSDPVAAIKMHYSNSDQCGSQNGSIMREDESWGGKGDLGR 1666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3411g00001 1666 ProSiteProfiles SANT domain profile. 791 842 IPR017884 -
Gabi3411g00001 1666 SUPERFAMILY Homeodomain-like 779 839 IPR009057 -
Gabi3411g00001 1666 ProSiteProfiles SANT domain profile. 1006 1054 IPR017884 -
Gabi3411g00001 1666 Gene3D - 772 844 - -
Gabi3411g00001 1666 CDD SANT 1007 1046 IPR001005 -
Gabi3411g00001 1666 Coils Coil 417 444 - -
Gabi3411g00001 1666 Pfam Myb-like DNA-binding domain 1006 1048 IPR001005 -
Gabi3411g00001 1666 SUPERFAMILY Homeodomain-like 1005 1054 IPR009057 -
Gabi3411g00001 1666 MobiDBLite consensus disorder prediction 116 134 - -
Gabi3411g00001 1666 MobiDBLite consensus disorder prediction 34 48 - -
Gabi3411g00001 1666 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1663 - -
Gabi3411g00001 1666 MobiDBLite consensus disorder prediction 99 115 - -
Gabi3411g00001 1666 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1007 1057 IPR017930 -
Gabi3411g00001 1666 SMART sant 1004 1052 IPR001005 -
Gabi3411g00001 1666 SMART sant 792 840 IPR001005 -
Gabi3411g00001 1666 MobiDBLite consensus disorder prediction 208 222 - -
Gabi3411g00001 1666 MobiDBLite consensus disorder prediction 1 134 - -
Gabi3411g00001 1666 MobiDBLite consensus disorder prediction 1643 1666 - -
Gabi3411g00001 1666 Gene3D - 982 1063 - -
Gabi3411g00001 1666 ProSiteProfiles Myb-like domain profile. 1006 1050 IPR001005 -
Gabi3411g00001 1666 MobiDBLite consensus disorder prediction 1095 1117 - -
Gabi3411g00001 1666 MobiDBLite consensus disorder prediction 8 27 - -
Gabi3411g00001 1666 MobiDBLite consensus disorder prediction 208 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3411g00001 Gabi-Chr3411 5882 17552 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi3411g00001 Myb_DNA-binding 7.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3411g00001 - - gmx:100810588 2089.31