Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3405g00001 ATGGTCGTCACCACCCAACGAAGGAGCTGCTGCACCTTCTCTCTCTCTCTTCTCCTTCTATTCATCGCCGTCTTCCAAACCCTAAACCCAAATCCCTCGCCGCCACCTCACCACCATGGCAACTACATCGTGGGGTTCTCGGAGTACAAGAGCGCCGAGCACCACCGCGCCTATCTGGAATCCAGCCTCGGATCAAAAGGGTGGTGGTGGATTGACCGGCGGAACCCGGCGGCGAAGTACCCCACCGATTTTGGATTGGTTTCCGTTGAGGATTTGGGGTTGATTGAGGTGATTCGGAAACTGGGTTTGGTGAAGTACGTGAGTTTGGATATGAGTTATAAGAGGGGTTTGATGAAGCATCATGAGAGGGATAAGAAAGTTGGTGCCTTTGTGGATGGGAAGAAGCGCCCCGGGAAAATCTTCACGACGATGTCGTTTTGTGAGGCAGAAGAAGGAGAAGAAGAAGAAGAAGATATTCGCAACAATTCAATCAAGTTGGGGCGACAACTGATGATGCAGCAGAGATCGCAAGTTACTTCCATGTTTGGAGCGGAAGATCTTTGGAGGAAAGGGTACACTGGTGCGAAGGTCAAGATGGCCATATTTGATACTGGCATTCGAGCTGATCATCCTCATTTCCGTAATATCAAGGAGCGTACAAATTGGACCAATGAGGATAGATTGAATGACAATCTTGGACATGGGACTTTTGTTGCTGGTGTTATTGCTGGTGTAGATGCGGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGTGTTTTCACTGATGCACAGGTGTCATATACATCATGGTTCCTTGATGCCTTCAACTATGCAATCGCAACCAATATGGATGTGCTAAATTTGAGCATAGGTGGACCTGATTATATGGATCTCCCATTTGTTGAAAAGATATGGGAGATAACAGCAAATAACATAATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAATAATCCCGCAGATCAAAGTGATGTCATTGGAGTTGGTGGCATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGTATGAGTACCTGGGAGCTTCCTCATGGTTATGGCCGTGTGAAGCCAGACATAGTTGCATATGGACGGGACATTATGGGTTCAAAGATTAGTGCAGGTTGTAAAAGTTTATCAGGAACCAGTGTTGCAAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTTAGTGTCATTCCTGAACTTGATCGAAAAAATATCGTAAACCCAGCAAGCATGAAACAAGCATTGGTCGAGGGTGCTGTAGAGCTTGATGGGCCTAACATGTTAGAATCATACAAGATTCTTAAGAGCTACAAACCTAGGGCAAGCATCTTTCCCAGTGTTCTTGATTATACAGATTGTCCTTACACATGGCCTTTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTTATCGGCTACATTGAAAGTCCCCCAACATGGCATCCTTCTAAAGAAGAAGGGAATCTTCTAAGCATTCATTTTACATATTCTGAGATCATCTGGCCTTGGACTGGTTATTTAGCCCTTCACATGCAAATCAAGGAAGAAGGTGCACAGTTTTCTGGGAATATTGAAGGTAATGTGACTCTCAGGATTTCCAGTCCTCCAGCTCAAGGAGAGAAGGACCCTCGAGTTAGCATCTGTGTGCTTCAAATAAAGTTAAAAGTGGTACCAACACCGCCACGAGCAAAACGAGTATTGTGGGATCAGTTTCACAGTATCAAATACCCTCCAGGTTATATTCCCAGAGATTCCTTGGATGTTCGTAATGACATTCTTGACTGGCATGGGGATCATCTGCATACAAATTTTCACATCATGTTCAACATGTTACGAGATGCTGGTTACTATGTTGAAGCTCTCGGTTCACCTCTTACATGCTTTGATGCTCGACAGTATGGAACACTTCTGTTGGTGGATCTTGAGGAAGAGTACTTTGCTGAGGAAATTGAAAAGCTGAGAGACGATGTTATAAATACTGGATTGGGATTAGCTATCTTCGCTGAGTGGTATAATGTAGATTCAATGGTAAAGATGAGATTCTTTGATGACAATACTCGGAGCTGGTGGACCCCAGTCACTGGAGGTGCTAATATTCCTGCACTTAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGATAAGATTCTGAATGGTGATTTTTCACTTTCCGGTGAGCAGAATCGATATGCTTCTGGAACAGATATAGTGAGGTTTCCAAGGGGTGGTTATGTACATAGCTTTCCTTTCTTGGATAGTTCAGAAAGTGGAGCCACTCAGAATAAGCTACTGACTTCTGGCAAAACCAAGGCAGATTCTCCAATTCTTGGTCTTACAGTGATGGGTGAAGGTCGCATAGCTGTGTATGGGGACTCCAATTGTTTGGACAGCAGCCACATGGTTACTAATTGTTTTAGTCTTCTTAGGAAAATACTAGATTTTACTAGTGAAGATGTTAGAGATCCAGTGCTTTTCTCTGATTCAACTAAACAAAATAATCCCTTGTATGAAGATGATAATCGGTTGCCATCCCGCAGAACTGATGTGAATTTCTCTGCATATTCAGCTGTTATAGGGAAAGAATTGATCTGCAGGACTGACACAAGGTTTGAAATATGGGGAACTATGGGCTTCAATTTACACGTCAGAGGAAGAAACAGAAGATTGCCCGGTTATCCTGTCATTGATTTGGGGAGTGGTTTCAATTCAACCTTTGATGCTTCTTACATTAGGCATCCCAAGTTAACTGTGAGAAATAAGGATGTCTCTCTAGGGAACAGATATTTAGGCCTGTTCTATGGGGATGAGCTTGATGCACCTATATTAGTTGGTAGTCACTGGCTTGTTCCTGTTGTTGTTGCAGCAACTGGTATTTTGCTATTGAGTTTTTGGCGAATTCGCCAAAAGAGACGTCGACGAAGGAAAGGATCAAGTTTGTTGGCCAATTTATAG 3054 0.4358 MVVTTQRRSCCTFSLSLLLLFIAVFQTLNPNPSPPPHHHGNYIVGFSEYKSAEHHRAYLESSLGSKGWWWIDRRNPAAKYPTDFGLVSVEDLGLIEVIRKLGLVKYVSLDMSYKRGLMKHHERDKKVGAFVDGKKRPGKIFTTMSFCEAEEGEEEEEDIRNNSIKLGRQLMMQQRSQVTSMFGAEDLWRKGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDRLNDNLGHGTFVAGVIAGVDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYMDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISAGCKSLSGTSVASPVVAGVVCLLVSVIPELDRKNIVNPASMKQALVEGAVELDGPNMLESYKILKSYKPRASIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNATILNGMGVIGYIESPPTWHPSKEEGNLLSIHFTYSEIIWPWTGYLALHMQIKEEGAQFSGNIEGNVTLRISSPPAQGEKDPRVSICVLQIKLKVVPTPPRAKRVLWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVEALGSPLTCFDARQYGTLLLVDLEEEYFAEEIEKLRDDVINTGLGLAIFAEWYNVDSMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLSGEQNRYASGTDIVRFPRGGYVHSFPFLDSSESGATQNKLLTSGKTKADSPILGLTVMGEGRIAVYGDSNCLDSSHMVTNCFSLLRKILDFTSEDVRDPVLFSDSTKQNNPLYEDDNRLPSRRTDVNFSAYSAVIGKELICRTDTRFEIWGTMGFNLHVRGRNRRLPGYPVIDLGSGFNSTFDASYIRHPKLTVRNKDVSLGNRYLGLFYGDELDAPILVGSHWLVPVVVAATGILLLSFWRIRQKRRRRRKGSSLLANL 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3405g00001 1017 ProSitePatterns Serine proteases, subtilase family, histidine active site. 234 244 IPR022398 -
Gabi3405g00001 1017 Pfam Subtilase family 195 442 IPR000209 GO:0006508|GO:0008236
Gabi3405g00001 1017 FunFam subtilisin-like protease SBT6.1 165 453 - -
Gabi3405g00001 1017 PRINTS Subtilisin serine protease family (S8) signature 194 213 IPR015500 -
Gabi3405g00001 1017 PRINTS Subtilisin serine protease family (S8) signature 230 243 IPR015500 -
Gabi3405g00001 1017 PRINTS Subtilisin serine protease family (S8) signature 397 413 IPR015500 -
Gabi3405g00001 1017 ProSiteProfiles Serine proteases, subtilase domain profile. 173 460 - -
Gabi3405g00001 1017 PANTHER PEPTIDASE S8 30 446 - -
Gabi3405g00001 1017 ProSitePatterns Serine proteases, subtilase family, serine active site. 398 408 IPR023828 -
Gabi3405g00001 1017 Gene3D Peptidase S8/S53 domain 163 455 IPR036852 GO:0004252|GO:0006508
Gabi3405g00001 1017 SUPERFAMILY Subtilisin-like 177 444 IPR036852 GO:0004252|GO:0006508
Gabi3405g00001 1017 CDD Peptidases_S8_SKI-1_like 188 444 IPR034185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3405g00001 Gabi-Chr3405 5595 11857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3405g00001 268 998 Subtilisin-like Serine Gene Family AT5G19660 77.419 0.0 1207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3405g00001 K08653 - gmx:100819188 1750.72