Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3404g00026 ATGGAAATTGAACCGTCCTTCTTGGTCATTACCTTCTTTCTGTTCTTGCTGTTGCATTGGCTTGCAAAATATTACAAGCCAATGTCCAGTCTCGTTCACAAACTGCCACCTGGACCAAGGAAGTTACCTCTCATTGGGAACCTGCATCAACTAGCAGGGTCACTTCCACATCGTGCTTTTCGAGAACTTGCCCACAAATATGGACCTCTCATGCACCTACAACTTGGTGAAATTTCTGTAGCGGTTGTATCCTCTCCCAGGTTGGCCAAGGAGATTATGAAAACCCATGATGTTGCTTTTTTGCAGAGGCCCCAACTTCTTCCTGCTCAAATTTTGGCCTATGGGCCAGCAGATATTGCTTTTGTTCCATATGGTGATTATTGGAGACAAATGAGGAAAATATGTGTGTTGGAGCTTCTAAGTTCCAAGAAGGTTAAGTCTTTCTCTTTTGTTAGAGAACATGAAACAGCAAAATTCATAGAATCAATTGAGACATCCACAGGTTCACCAATCAATCTTACTAGTAGAATTTTCTCCTTGGTAAGTTCTTCTGTTTGCAGGGCAGCATTTGGTAACAAAACCAAGGACCAGGATGAATTTATAACTTTGATAAAAGATGTGATAGCACATGCAGGAGGATTTGACCTGGCTGATTTGTTTCCTTCTATTAAACCTATACATTTCATAACTGGGATAAGGCCCAAGTTGGAGAAGTTGCACAAGCGGCTTGACAAAATTTTACAAAACATTGTCACAGAGCACCAAGAAAAGCACATGAGAGCCCAAGAAGGCAAGGTTGAAGCAGAGGAGGAAGATCTTGTTGATGTTCTTTTGAGAATCCAACAAAGTGACAGCCTCGGAATCAAAATAACGACCCGAAACATCAAAGCTGTCATTTTGGATGTATTTATTGCTGGAACTGATACTTCAGCGTCGACCCTAGATTGGGCTATGTTAGAAATGATAAGAAACCCAAGAGTAAGGGAGAAGGCACAAGCTGAGTTAAGACAAGCGTTTAAGGGAAAGAAAATAATCCATGAAACTGATATAGAGGAACTTAGTTACTTAAACCTGGTTGTTAAAGAGACATTGAGGCTACACCCACCTACTCCTTTGTTGCTTCCTAGAGAATGCTCTGAACTAACCATCATTGATGGGTATGAAATACCGATCAAAACTAAAGTGATGGTAAACGTATGGGCAATGGGAAGAGATCCCCAATATTGGTCTGATGCTGAGAGTTTTACTCCAGAGAGGTTTGATGGCAGTTCCATTGATTTCAAAGGGAATAACTTTGAGTTCATTCCATTTGGGGCAGGAAGGAGAATGTGCCCAGGCATGTCATTTGGTTTAGCTAACATTGTGCTTCCTCTGGCTCTATTACTTTATCATTTCAACTGGGAACTCCCAAATGGACTGAAATCTGAGGATTTGGATATGACAGAAAGCTTCGGAGTGGCAATTGAAAGGAAAAGTCAGTTGTATTTGATTCCCACTGTTTATGATCCCTCACTGCATGCCTGA 1524 0.4127 MEIEPSFLVITFFLFLLLHWLAKYYKPMSSLVHKLPPGPRKLPLIGNLHQLAGSLPHRAFRELAHKYGPLMHLQLGEISVAVVSSPRLAKEIMKTHDVAFLQRPQLLPAQILAYGPADIAFVPYGDYWRQMRKICVLELLSSKKVKSFSFVREHETAKFIESIETSTGSPINLTSRIFSLVSSSVCRAAFGNKTKDQDEFITLIKDVIAHAGGFDLADLFPSIKPIHFITGIRPKLEKLHKRLDKILQNIVTEHQEKHMRAQEGKVEAEEEDLVDVLLRIQQSDSLGIKITTRNIKAVILDVFIAGTDTSASTLDWAMLEMIRNPRVREKAQAELRQAFKGKKIIHETDIEELSYLNLVVKETLRLHPPTPLLLPRECSELTIIDGYEIPIKTKVMVNVWAMGRDPQYWSDAESFTPERFDGSSIDFKGNNFEFIPFGAGRRMCPGMSFGLANIVLPLALLLYHFNWELPNGLKSEDLDMTESFGVAIERKSQLYLIPTVYDPSLHA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3404g00026 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Gabi3404g00026 507 Gene3D Cytochrome P450 31 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PANTHER OS08G0105600 PROTEIN 59 503 - -
Gabi3404g00026 507 Coils Coil 251 271 - -
Gabi3404g00026 507 CDD CYP71-like 66 494 - -
Gabi3404g00026 507 FunFam Cytochrome P450 71D8 28 498 - -
Gabi3404g00026 507 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00026 507 Pfam Cytochrome P450 36 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3404g00026 Gabi-Chr3404 326615 328823 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3404g00026 33 503 Cytochrome P450 AT3G26300 43.659 3.18e-140 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3404g00026 - K15472 aprc:113870280 742.265