Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3404g00023 ATGGAAACTCAAGCGTCCTTCTTGGTTATCAGCTTCTTTCTGTTTTCGCTGTTGCATTGGCTTGTAAAATATTACAAGCCAAAAGGCACTCTTGTCCCCAAACTGCCCCCAGGTCCAAGGAAGTTACCTCTCATTGGGAACCTGCATCAACTAGCACTTGCAGGTTCTCTTCCACACCATTCTCTTGGAGAACTTGCCCACAAATATGGGCCTCTCATGCACCTCAAACTTGGTGAAATTTCTGTTGTTGTTGTATCCTCTCCAAGGTTGGCCAAGGAGATTATGAAAACCCATGATGTTTCTTTTGTGAATAGGCCACAACTTCTCCCTGCTCAGATTTTGACTTATGGGGCAACAGATATTGCTTTTGCTCCATATGGTGATTACTGGAGACAAATGAGGAAAATATGTACGATGGAGCTTCTAAGTTCCAAGAAAGTTCAGTCTTTCTCTTTTATTAGAGAAGATGAGACTGCCAAATTTATAGAAGCAATTCGAACATCAGCAGGTTCACCAATCGATCTTACTAGTAGAATTTTCTCTTTGGTAAGTGCTTCTGTTTCCAGGGCAGCTTTTGGTGACAAATCTGAGGACCAAGATGAATTTATATCTTTGACTAAAAAAATAATAGCATCGGCAGGAGGATTTGACCTCGCTGATTTGTTTCCTTCAATGAAACCTATACACTTCATAACTGGGGTGAAGCCGAAATTGGAGAAGTTGCACAAACAGGTTGACAAGATCTTAGAAAACATTGTCACGGAGCATAAAAAAAAGCAAAGAAGAGCAATAGAAGGCAGAGTTGAAGTACAGGAGGAAGATCTTGTTGATGTTCTTTTGAGAATCCAAAAAAGTGGGAATCTCGAGATCCAAATTACCACCGCAAACATCAAAGCTGTGATATTGGACGTATTTTCTGCTGGAACTGATACTTCAGCATCGACAATAGAGTGGGCTATGACAGAAATGATGAGAAATCCAAGAGTGAGGGAGAAAGCACAAGCTGAGTTAAGACAAGCATTTAAAGGAAAGGAAATAATACATGAAACTGATATAGAGGAACTTAGTTACTTAAAATTGGTGATCAAAGAGACATTGAGGTTACACCCACCTACTCCTTTATTGATCCCTAGAGAATGCTCTGAACTAACCATCATTGATGGGTATGAAATTCCTATTAAGACTAAAGTGATGGTAAACGTATGGGCAATTGGAAGAGACCCCAACTGTTGGACTGATGCTCAGAGGTTTGTGCCAGAGAGGTTCGATGGCAGTTCCATTGATTTCAAAGGGAATAACTTTGAGTATATTCCTTTTGGGGCAGGAAGGAGAATGTGCCCAGGCATGTCGTTTGGTTTAGCCAGCATTATGCTTCCTCTGGCTCTATTACTCTATCACTTCAACTGGGAACTCCCTAATGGGTTGAAACCTGAGGATTTGGATATGGCTGAGCACTTTGGATTGGCAGTTGGAAGGAAAAGCGAGTTGAGTTTGGTTCCCATTGTTTATGATCTTTGA 1518 0.4104 METQASFLVISFFLFSLLHWLVKYYKPKGTLVPKLPPGPRKLPLIGNLHQLALAGSLPHHSLGELAHKYGPLMHLKLGEISVVVVSSPRLAKEIMKTHDVSFVNRPQLLPAQILTYGATDIAFAPYGDYWRQMRKICTMELLSSKKVQSFSFIREDETAKFIEAIRTSAGSPIDLTSRIFSLVSASVSRAAFGDKSEDQDEFISLTKKIIASAGGFDLADLFPSMKPIHFITGVKPKLEKLHKQVDKILENIVTEHKKKQRRAIEGRVEVQEEDLVDVLLRIQKSGNLEIQITTANIKAVILDVFSAGTDTSASTIEWAMTEMMRNPRVREKAQAELRQAFKGKEIIHETDIEELSYLKLVIKETLRLHPPTPLLIPRECSELTIIDGYEIPIKTKVMVNVWAIGRDPNCWTDAQRFVPERFDGSSIDFKGNNFEYIPFGAGRRMCPGMSFGLASIMLPLALLLYHFNWELPNGLKPEDLDMAEHFGLAVGRKSELSLVPIVYDL 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3404g00023 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 Gene3D Cytochrome P450 32 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Gabi3404g00023 505 PANTHER OS08G0105600 PROTEIN 60 503 - -
Gabi3404g00023 505 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3404g00023 505 FunFam Cytochrome P450 71D8 28 500 - -
Gabi3404g00023 505 CDD CYP71-like 68 496 - -
Gabi3404g00023 505 Pfam Cytochrome P450 36 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3404g00023 Gabi-Chr3404 269876 272074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3404g00023 34 503 Cytochrome P450 AT3G26300 44.906 2.08e-141 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3404g00023 - K15472 gmx:100816377 759.599