Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3399g00049 ATGGCAACAACAAATGGTGAGAGAGTGGCAATAGGAATCGATCTAGGCACAACCTACTCATGCGTTGCTGTGTGGCGCCACGATCGAGTGGAGATCATCGTCAACGATCAAGGCAACCGAATAACACCATCTTGCGTTGCCTTCACTCCCACCCAAAAGATGATTGGTGAAGCTGCTCAGAACCAGGCTGCTACCAACCCTGTCAACACTGTCTTTGATGCAAAGCGGTTAATTGGAAAGAGATTTAGTGACCCCACGGTTCAGAGTGATATGAAGTTATGGCCATTCAAAGTTATTGCAGGTGTTAATGACAGGCCCATGATTGTTGTTAATTACAATGGTGAGGAAAAACATTTTTCTGCTGAGGAAATTTCATCCATGGTCTTGACAAAGATGCGTGAGATTGCAGAGGCTTTTCTTGGATCAATGGTGACAGATGTTGTTGTGACTGTGCCTGCTTACTTTGATAACTTTCAACGTCAAGCTACCAGAGATGCTGGTGCTATTGCTGGCCTCAATGTTATTCGAATAATTAATGAGCCTACTGCTGCAGCAATTGCATATGGCCAGCTTCACACTAAAGATTATAGTCTGGGAAGTAAAAATGTTTTCATCTTCGATCTTGGTGGTGGTACTCTGGATGTGTCTCTTCTCACAATTAAGAATGATGATATCCAAGTTAGGGCCATTGATGGAGACACTCACCTTGGTGGAGAGGACTTTGACAAGAGAATGATGAACTATTGTGTGAATGAGTTCGAGAGAAAGAACCAAATGGACATTACTGGAAACCCAAGAGCCCTTAGGAGGTTGAGGACTGCTTGTGAGAAAGCAAAGAGGACACTCTCTTCCACTACGGAGACCACTATTGAATTAGATTGTTTATATCAGGGTATTGATTTCTACTCATCAATCACTCGTGCAAAGTTTGAGGAACTCAACAGGGACCAGTTTGACAAGTGTATGGAGCATGTGGAGAAGTGTCTGAAAGATTCTAAGATGGAAAAGAGCAGGGTTGATGATGTTGTCCTTGTAGGTGGCTCTACAAGGATTCCAAAAGTGCAGCAGCTATTGAGGGACTTCTTTGATGGAAAGGATCTATGCATGAGCATCAATGCTGATGAGGCTGTTGCTTATGGTGCTGCTGTCCAGGCTTTTAGATTGAGTAGTAGTGAGTTCAATGAGAAGGTTAATCATGTGTGTGAAGTCACTCCTCTGTCCCTTGGGGTGAAAATAAATGGAGGTATCATGAAAGTAATGATACCTAGGAATACTATCTTTCCTACAAAGATGGAACATGTATTCACCACACATTTTGATAACCAAATCATTATATTGATTCATGTTTACGAGGGCGAGAGGCAAATAACTAGTGGCAACAACTTGCTAGGTGAATTTGAGCTGGAAATACCTCCAGCTCCTCGGGGTGTTCCTCAAATCAATGTCAGCTTTCAAATTGATGATGATGGTATCCTACACGTCTCTGCCACGGAAAAATTAAATGGAATAAACAAGAAGGTTGTGATAATAAATGACAAGGGAAGGCTTTCAATGGAAGAAATTAAGAGGATGATCAGAGAAGCTGAGAAGTACAAGGCTGGAGATGAGGAGTACCTGAAGAAGGTAAAAGCAAGGAATGCATTGGAGAAGTATGCATACAACATGAGGAATGCTATAAATAATAAGGAGATTAGTTTGAAGCTTTCCCAACAAGACAAGAAAAGGATCAACAGTGCAATTGATATGGCCTTAGGATGGCTTGAAGTCAATGTGGTTGCAGAACAAGAAGATTTTGACAAGATAAGGAGTGTTCTTTCGAGTGTCTTTGATCCAATTATTATGAAGATGATAAAGGATGAGGATGATGATGGTGTGCCCCCTGGTGGTACTGTTGTTGCTGGCTCTGATATGAATAATAAAAAGAATCGCTTGTTATCAATATTGGGAAAATTTGCTTTCGAGGCAGTAATTTCAGCTGTTACAGGTAATATCACTGGGTTGGTTTCTTCTGTAATTCAAGCTATTATTCAAACTATTTAA 2040 0.4118 MATTNGERVAIGIDLGTTYSCVAVWRHDRVEIIVNDQGNRITPSCVAFTPTQKMIGEAAQNQAATNPVNTVFDAKRLIGKRFSDPTVQSDMKLWPFKVIAGVNDRPMIVVNYNGEEKHFSAEEISSMVLTKMREIAEAFLGSMVTDVVVTVPAYFDNFQRQATRDAGAIAGLNVIRIINEPTAAAIAYGQLHTKDYSLGSKNVFIFDLGGGTLDVSLLTIKNDDIQVRAIDGDTHLGGEDFDKRMMNYCVNEFERKNQMDITGNPRALRRLRTACEKAKRTLSSTTETTIELDCLYQGIDFYSSITRAKFEELNRDQFDKCMEHVEKCLKDSKMEKSRVDDVVLVGGSTRIPKVQQLLRDFFDGKDLCMSINADEAVAYGAAVQAFRLSSSEFNEKVNHVCEVTPLSLGVKINGGIMKVMIPRNTIFPTKMEHVFTTHFDNQIIILIHVYEGERQITSGNNLLGEFELEIPPAPRGVPQINVSFQIDDDGILHVSATEKLNGINKKVVIINDKGRLSMEEIKRMIREAEKYKAGDEEYLKKVKARNALEKYAYNMRNAINNKEISLKLSQQDKKRINSAIDMALGWLEVNVVAEQEDFDKIRSVLSSVFDPIIMKMIKDEDDDGVPPGGTVVAGSDMNNKKNRLLSILGKFAFEAVISAVTGNITGLVSSVIQAIIQTI 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3399g00049 679 Gene3D - 193 368 - -
Gabi3399g00049 679 FunFam Heat shock 70 kDa protein 72 127 - -
Gabi3399g00049 679 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Gabi3399g00049 679 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 396 544 IPR029047 -
Gabi3399g00049 679 PANTHER HEAT SHOCK PROTEIN 70KDA 10 580 IPR013126 GO:0005524|GO:0140662
Gabi3399g00049 679 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Gabi3399g00049 679 Gene3D Actin; Chain A, domain 4 237 320 - -
Gabi3399g00049 679 Gene3D - 11 385 - -
Gabi3399g00049 679 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 400 549 IPR029047 -
Gabi3399g00049 679 Pfam Hsp70 protein 10 616 IPR013126 GO:0005524|GO:0140662
Gabi3399g00049 679 SUPERFAMILY Actin-like ATPase domain 8 189 IPR043129 -
Gabi3399g00049 679 Coils Coil 268 288 - -
Gabi3399g00049 679 Gene3D - 72 127 - -
Gabi3399g00049 679 PRINTS 70kDa heat shock protein signature 37 49 - -
Gabi3399g00049 679 PRINTS 70kDa heat shock protein signature 211 221 - -
Gabi3399g00049 679 PRINTS 70kDa heat shock protein signature 147 167 - -
Gabi3399g00049 679 PRINTS 70kDa heat shock protein signature 371 391 - -
Gabi3399g00049 679 PRINTS 70kDa heat shock protein signature 9 22 - -
Gabi3399g00049 679 PRINTS 70kDa heat shock protein signature 477 493 - -
Gabi3399g00049 679 PRINTS 70kDa heat shock protein signature 339 355 - -
Gabi3399g00049 679 PRINTS 70kDa heat shock protein signature 397 416 - -
Gabi3399g00049 679 PRINTS 70kDa heat shock protein signature 59 67 - -
Gabi3399g00049 679 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Gabi3399g00049 679 FunFam Heat shock 70 kDa 237 320 - -
Gabi3399g00049 679 FunFam Heat shock protein 70 11 200 - -
Gabi3399g00049 679 FunFam Heat shock 70 kDa protein 391 545 - -
Gabi3399g00049 679 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Gabi3399g00049 679 FunFam Heat shock cognate 70 kDa protein 2 321 368 - -
Gabi3399g00049 679 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 621 IPR029048 -
Gabi3399g00049 679 Gene3D - 545 642 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3399g00049 Gabi-Chr3399 445676 447936 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3399g00049 6 629 Calmodulin-binding Proteins AT3G12580 67.305 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3399g00049 K03283 - gmx:100798636 900.582