Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3399g00045 ATGTCTTTTCAGCACAAAAGCTTCTGGATGCTGCGGGATGCTGGATGCTTAGCTGAAGAAAATATGGGACTTGAGAATTCTTCCAGAATTGAACCAAAGCGAAGTCATCAGTGGTTTATGGATATAGGGGAACCAGAAATATTCAGCAACAAGAAACAAGCAGTTGAAGCTGTTAGTGGCAGGCCAGTTCCGGGAGTTTCACATGTGAATGTTACTCAATGGGACACCAATTCCGGATTTCACTCAGCCACAGGTCAATTTTCTGACCGTCTCTTTGGATCTGATCTTGTACAGACTGGCAGTACTGGCTACAATAAGAATGATGGCAACATTTCGTTGGGCCCAACTTATAACAGTGGAAATGACTGTACCATCGCTATGGGTACCAGAATAAGTAGGACTGATGACAATCTTGTTTCTATGGGTCACGCCATCAATAAAGAGGATGGGAGTTTTATGTTGATGGGGCACAATTATGGCAAGGGAGCCGAAAGCATCTTATCAATGGGTCAGCCCTTTGACAGGGGGGATGAAAATTTCATATCAATGGGTCAGTCATATGAAAAGGAAGGCGGCAATTTGATATCTCTGGGTACCTCATTTGCCAAGGGGCATGAGAGCTTTATGTCAATGGGTGCAACCTATAGTAAATCAGGAGAAGATTTCATAACCATTGCTCCTTCTTATGACAAGGGCACTGATCATATAATATCAATGGGTCCAACATATGATAAGGTGGATTCAAACATTGCATCAACAGTTCCATCATATGACAGAGGAGATTCTAGCTCTTTACCTGTAGATCAAAACCACAATAAGGGTCAGAGCAGTACTATATCTTTTGGAGGTTTTCATGATGACCCTGAGCCAAATCCCTCTGGTGGAATCATTAGTGGATATGATCTGTTGATGGGCATCCAGAATTCAGCTCAGGGTTTGGATAGCCAAAAGGATCTGACTGAGTCGAACTCTGAACCACCTGTAAATAGCATTCTAAAACCTAATACTAAAAGTGATACTATCCTTAAGAACAAAGAGCCCAAGACAACTAAGAAGGCAACTCCTAACAACTTCCCTTCAAATGTCAAAAGTTTGTTGTCAACTGGTATTTTTGATGGTGTTCCGGTTGAATATTACTCATGGTCACGGGAGAAAAATCTTACAGGAATCATAAAAGGAACTGGGTATTTATGCTCGTGTGATGACTGCAATCAGTCAAAGGCTCTTAATGCATATGAGTTTGAACGTCATGCTGGTGCCAAGACAAAACACCCTAACAATCACATATACTTTAAGAATGGAAAAACCATCTATGCTGTTGTCCAAGAGCTGAAAAACACTCCTCAGGAGAAGCTTTTTGATGCAATTCAAAGTGTGACTGGCTCCCCCATCAACCAAAAGAACTTTCGTATTTGGAAAGCATCATACCAAGCTGCTACGCGGGAGCTTCAGCGTATCTATGGAAAGGATGAAGTTGTCATACCATCTTGA 1491 0.4178 MSFQHKSFWMLRDAGCLAEENMGLENSSRIEPKRSHQWFMDIGEPEIFSNKKQAVEAVSGRPVPGVSHVNVTQWDTNSGFHSATGQFSDRLFGSDLVQTGSTGYNKNDGNISLGPTYNSGNDCTIAMGTRISRTDDNLVSMGHAINKEDGSFMLMGHNYGKGAESILSMGQPFDRGDENFISMGQSYEKEGGNLISLGTSFAKGHESFMSMGATYSKSGEDFITIAPSYDKGTDHIISMGPTYDKVDSNIASTVPSYDRGDSSSLPVDQNHNKGQSSTISFGGFHDDPEPNPSGGIISGYDLLMGIQNSAQGLDSQKDLTESNSEPPVNSILKPNTKSDTILKNKEPKTTKKATPNNFPSNVKSLLSTGIFDGVPVEYYSWSREKNLTGIIKGTGYLCSCDDCNQSKALNAYEFERHAGAKTKHPNNHIYFKNGKTIYAVVQELKNTPQEKLFDAIQSVTGSPINQKNFRIWKASYQAATRELQRIYGKDEVVIPS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3399g00045 496 PANTHER AUTOIMMUNE REGULATOR 9 446 - -
Gabi3399g00045 496 MobiDBLite consensus disorder prediction 313 338 - -
Gabi3399g00045 496 MobiDBLite consensus disorder prediction 313 357 - -
Gabi3399g00045 496 Pfam Tify domain binding domain 389 444 IPR032308 -
Gabi3399g00045 496 MobiDBLite consensus disorder prediction 254 298 - -
Gabi3399g00045 496 MobiDBLite consensus disorder prediction 254 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3399g00045 Gabi-Chr3399 404023 408682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3399g00045 348 477 PHD Transcription Factor Family AT3G53680 53.846 3.28e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3399g00045 - - gmx:100782217 676.781