Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3399g00044 ATGTCTTTTCAGCACAAAAGCTTCTGGATGCTGCGGGATGCTGGATGCTTAGCTGAAGAAAATATGGGACTTGAGAATTCTTCCAGAATTGAACCAAAGCGAAGTCATCAGTGGTTTATGGATATAGGGGAACCAGAAATATTCAGCAACAAGAAACAAGCAGTTGAAGCTGTTAGTGGCAGGCCAGTTCCGGGAGTTTCACATGTGAATGTTACTCAATGGGACACCAATTCCGGATTTCACTCAGCCACAGGTCAATTTTCTGACCGTCTCTTTGGATCTGATCTTGTACAGACTGGCAGTTTGGTTGATAAGAACATGCCATCAATTGGAAGTGGAAATCTGAATGTAGTAAGGAAGGATTTTGAGAAGCAATATTTTAATGATCCATCTGTGGGCTTGTCAATATCTCATCCCATAGCAGACCCCTCATCATGTCTCAATCTTGGTGGCATCAGAAAAGTTAAAGTTAATCAGGTCAGAGATTCTGACAATTGTATGCCTTTTTACATAGGGGACTCCTATAGTAGGGCAGATAATAGTACAATTTCAATAGGTACTGGCTACAATAAGAATGATGGCAACATTTCGTTGGGCCCAACTTATAACAGTGGAAATGACTGTACCATCGCTATGGGTACCAGAATAAGTAGGACTGATGACAATCTTGTTTCTATGGGTCACGCCATCAATAAAGAGGATGGGAGTTTTATGTTGATGGGGCACAATTATGGCAAGGGAGCCGAAAGCATCTTATCAATGGGTCAGCCCTTTGACAGGGGGGATGAAAATTTCATATCAATGGGTCAGTCATATGAAAAGGAAGGCGGCAATTTGATATCTCTGGGTACCTCATTTGCCAAGGGGCATGAGAGCTTTATGTCAATGGGTGCAACCTATAGTAAATCAGGAGAAGATTTCATAACCATTGCTCCTTCTTATGACAAGGGCACTGATCATATAATATCAATGGGTCCAACATATGATAAGGTGGATTCAAACATTGCATCAACAGTTCCATCATATGACAGAGGAGATTCTAGCTCTTTACCTGTAGATCAAAACCACAATAAGGGTCAGAGCAGTACTATATCTTTTGGAGGTTTTCATGATGACCCTGAGCCAAATCCCTCTGGTGGAATCATTAGTGGATATGATCTGTTGATGGGCATCCAGAATTCAGCTCAGGGTTTGGATAGCCAAAAGGATCTGACTGAGTCGAACTCTGAACCACCTGTAAATAGCATTCTAAAACCTAATACTAAAAGTGATACTATCCTTAAGAACAAAGAGCCCAAGACAACTAAGAAGGCAACTCCTAACAACTTCCCTTCAAATGTCAAAAGTTTGTTGTCAACTGGTATTTTTGATGGTGTTCCGGTTGAATATTACTCATGGTCACGGGAGAAAAATCTTACAGGAATCATAAAAGGAACTGGGTATTTATGCTCGTGTGATGACTGCAATCAGTCAAAGGCTCTTAATGCATATGAGTTTGAACGTCATGCTGGTGCCAAGACAAAACACCCTAACAATCACATATACTTTAAGAATGGAAAAACCATCTATGCTGTTGTCCAAGAGCTGAAAAACACTCCTCAGGAGAAGCTTTTTGATGCAATTCAAAGTGTGACTGGCTCCCCCATCAACCAAAAGAACTTTCGTATTTGGAAAGCATCATACCAAGCTGCTACGCGGGAGCTTCAGCGTATCTATGGAAAGGATGAAGTTGTCATACCATCTTGA 1746 0.4118 MSFQHKSFWMLRDAGCLAEENMGLENSSRIEPKRSHQWFMDIGEPEIFSNKKQAVEAVSGRPVPGVSHVNVTQWDTNSGFHSATGQFSDRLFGSDLVQTGSLVDKNMPSIGSGNLNVVRKDFEKQYFNDPSVGLSISHPIADPSSCLNLGGIRKVKVNQVRDSDNCMPFYIGDSYSRADNSTISIGTGYNKNDGNISLGPTYNSGNDCTIAMGTRISRTDDNLVSMGHAINKEDGSFMLMGHNYGKGAESILSMGQPFDRGDENFISMGQSYEKEGGNLISLGTSFAKGHESFMSMGATYSKSGEDFITIAPSYDKGTDHIISMGPTYDKVDSNIASTVPSYDRGDSSSLPVDQNHNKGQSSTISFGGFHDDPEPNPSGGIISGYDLLMGIQNSAQGLDSQKDLTESNSEPPVNSILKPNTKSDTILKNKEPKTTKKATPNNFPSNVKSLLSTGIFDGVPVEYYSWSREKNLTGIIKGTGYLCSCDDCNQSKALNAYEFERHAGAKTKHPNNHIYFKNGKTIYAVVQELKNTPQEKLFDAIQSVTGSPINQKNFRIWKASYQAATRELQRIYGKDEVVIPS 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3399g00044 581 MobiDBLite consensus disorder prediction 339 382 - -
Gabi3399g00044 581 MobiDBLite consensus disorder prediction 339 367 - -
Gabi3399g00044 581 Pfam Tify domain binding domain 474 529 IPR032308 -
Gabi3399g00044 581 PANTHER AUTOIMMUNE REGULATOR 9 531 - -
Gabi3399g00044 581 MobiDBLite consensus disorder prediction 398 423 - -
Gabi3399g00044 581 MobiDBLite consensus disorder prediction 398 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3399g00044 Gabi-Chr3399 404023 408682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3399g00044 433 562 PHD Transcription Factor Family AT3G53680 53.846 1.29e-38 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3399g00044 - - gmx:100782217 990.719