Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3399g00030 ATGGAGATAACCTACGCCTCACCAAGTTTCTCCGACCTCGCCACCGTTGCTTCCGCTTCCGCTTCCATGTCATCGCCGGCGACCTCCACCTCCCGCCCCGTAAGGGTCATCCCTTTGCAGCACCCGACCATTACCACGTCGTCTTCGTCTTCGTCGTTGCCGAATGTCGCGTTCTCGCGGTTCGCCACGAGGCTCCGGCGAATGACGTGGCTTGAATGGATCGAATTCTTCCTCCCTTGCTGCCGTTGGATTCGCATCTACAAATGGCGCGAGTATTTTCAGGTCGATCTCATGGCTGGCATCACCGTCGGTGTCATGCTTGTTCCTCAGTCTATGTCATATGCAAAGTTAGCTGGGCTTCAACCAATATATGGACTCTACGCTGGTTTTGTGCCCTTATTTGTGTATGCCATATTTGGGTCTTCTCGCCAGCTTGCAGTTGGCCCAGTAGCATTGGTTTCTCTCTTGGTTTCTAATGTGTTAAGTAGCATAGCTGATCCATCCAGTGAATTATACACAGAGCTGGCAATATTGCTGTCTCTTATGGTTGGGATACTGGAGTGCATAATGGGACTCTTGAGGCTTGGATGGCTGATTCGTTTTATTAGCCATTCGGTGATCTCCGGCTTTACAACTGCTTCAGCTATTGTGATTGGTTTATCTCAAGCGAAATACTTCTTGGGGTATGATATTGACAGAAGTAGCAAGATCATACCACTGGCTAAGAGTATAATAGCTGGAGCAGATAAGTTTTCATGGCCCCCTTTTGTGATGGGATCAGTTACGCTTGCAATACTACTTGTCATGAAGCACCTGGGAAAATCGAGGAAGCACTTGCGATTCTTGAGAGCTTCAGGTCCTCTTACAGCAGTAGTTCTGGGAACAGTTTTTGCAAAAGTATTTCATCCATCATCAATTTCTTTGGTGGGAGATATACCTCAGGGCCTACCAAAATTTTCTGTTCCAAAAGCTTTTGAGTATGCAGAGTCCTTAATTCCAACCGCTTTTCTCATAACTGGTGTGGCTATACTGGAATCAGTGGGAATTGCCAAGGCATTAGCAGCGAAGAATGGGTATGAGTTGGATTCAAATCAAGAGTTATTCGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCCACTACAGGATCCTTTTCAAGGTCAGCTGTTAATCATGAAAGTGGTGCAAAATCTGGAGTATCTGGGATTGTTTCAGGAATTATAATGACCTGTGCTCTTTTGTTTCTAACGCCTTTATTTGAGTACATACCTCAGTGTACTCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTATGATGAGGCCATTTTTTTGTGGCGTGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGTGCTACAACACTCTTTCTTGGGATTGAGATTGGTGTAATTGTTGGGGTTGGGGTTTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTGGGTCGTTTGCCAGGGACAACAGTTTATAGAAATGTTAAACAATATCCTGAAGCATATACATACAATGGAATTGTAATTGTTCGTGTTGATGCTCCTATTTATTTTGCAAACACAAGTTACATAAAGGACAGGTTACGGGAATTTGAAGTTGATGTTGATAGTTCTACAAGACGTGGACCTGAGGCCGAAAGAATTAATTTTGTGATTCTAGAGATGGCGCCTGTGACCTACATAGACTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGATTGCAATATCCAATCCAAGCCCCGAAGTTCTGCTAACCTTGTCTAGATCCGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAGCGTGTTCAAAGCTTGAAAGGGGGATCTAACATTTCACAAACACCACTCTCTTTATCTGAAGACAAATCAAGTTTCTTAGCCCGATTATTGAAAGAGAGAGGGGAGAACCTATCAATTACAGACTTGGAGTCTGGTATTGGCAGGTCTCCACTCTCCAGGGATAGAGATTCTCAACTGGAGCCATTGTTGTCAAAAGAACATTGA 2130 0.4394 MEITYASPSFSDLATVASASASMSSPATSTSRPVRVIPLQHPTITTSSSSSSLPNVAFSRFATRLRRMTWLEWIEFFLPCCRWIRIYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYAGFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLSSIADPSSELYTELAILLSLMVGILECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYDIDRSSKIIPLAKSIIAGADKFSWPPFVMGSVTLAILLVMKHLGKSRKHLRFLRASGPLTAVVLGTVFAKVFHPSSISLVGDIPQGLPKFSVPKAFEYAESLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSGIIMTCALLFLTPLFEYIPQCTLAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSATTLFLGIEIGVIVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRVDAPIYFANTSYIKDRLREFEVDVDSSTRRGPEAERINFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLTLSRSGLVELIGKEWYFVRVHDAVQVCLQRVQSLKGGSNISQTPLSLSEDKSSFLARLLKERGENLSITDLESGIGRSPLSRDRDSQLEPLLSKEH 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3399g00030 709 SUPERFAMILY SpoIIaa-like 518 640 IPR036513 -
Gabi3399g00030 709 FunFam Sulfate transporter 31 496 643 - -
Gabi3399g00030 709 ProSiteProfiles STAS domain profile. 516 640 IPR002645 -
Gabi3399g00030 709 CDD STAS_SulP_like_sulfate_transporter 517 633 - -
Gabi3399g00030 709 Pfam Sulfate permease family 93 466 IPR011547 GO:0016020
Gabi3399g00030 709 MobiDBLite consensus disorder prediction 690 709 - -
Gabi3399g00030 709 Pfam STAS domain 517 636 IPR002645 -
Gabi3399g00030 709 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Gabi3399g00030 709 Gene3D STAS domain 496 644 IPR036513 -
Gabi3399g00030 709 PANTHER SULFATE TRANSPORTER 58 643 IPR001902 GO:0016020|GO:0055085
Gabi3399g00030 709 NCBIfam sulfate permease 79 636 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3399g00030 Gabi-Chr3399 245660 256930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3399g00030 3 662 Inorganic Solute Cotransporters AT5G13550 73.083 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3399g00030 K18059 - gmx:100794754 1210.67