Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3399g00029 ATGGAGATAACCTACGCCTCACCAAGTTTCTCCGACCTCGCCACCGTTGCTTCCGCTTCCGCTTCCATGTCATCGCCGGCGACCTCCACCTCCCGCCCCGTAAGGGTCATCCCTTTGCAGCACCCGACCATTACCACGTCGTCTTCGTCTTCGTCGTTGCCGAATGTCGCGTTCTCGCGGTTCGCCACGAGGCTCCGGCGAATGACGTGGCTTGAATGGATCGAATTCTTCCTCCCTTGCTGCCGTTGGATTCGCATCTACAAATGGCGCGAGTATTTTCAGGTCGATCTCATGGCTGGCATCACCGTCGGTGTCATGCTTGTTCCTCAGTCTATGTCATATGCAAAGTTAGCTGGGCTTCAACCAATATATGGACTCTACGCTGGTTTTGTGCCCTTATTTGTGTATGCCATATTTGGGTCTTCTCGCCAGCTTGCAGTTGGCCCAGTAGCATTGGTTTCTCTCTTGGTTTCTAATGTGTTAAGTAGCATAGCTGATCCATCCAGTGAATTATACACAGAGCTGGCAATATTGCTGTCTCTTATGGTTGGGATACTGGAGTGCATAATGGGACTCTTGAGGCTTGGATGGCTGATTCGTTTTATTAGCCATTCGGTGATCTCCGGCTTTACAACTGCTTCAGCTATTGTGATTGGTTTATCTCAAGCGAAATACTTCTTGGGGTATGATATTGACAGAAGTAGCAAGATCATACCACTGGCTAAGAGTATAATAGCTGGAGCAGATAAGTTTTCATGGCCCCCTTTTGTGATGGGATCAGTTACGCTTGCAATACTACTTGTCATGAAGCACCTGGGAAAATCGAGGAAGCACTTGCGATTCTTGAGAGCTTCAGGTCCTCTTACAGCAGTAGTTCTGGGAACAGTTTTTGCAAAAGTGGGAGATATACCTCAGGGCCTACCAAAATTTTCTGTTCCAAAAGCTTTTGAGTATGCAGAGTCCTTAATTCCAACCGCTTTTCTCATAACTGGTGTGGCTATACTGGAATCAGTGGGAATTGCCAAGGCATTAGCAGCGAAGAATGGGTATGAGTTGGATTCAAATCAAGAGTTATTCGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCCACTACAGGATCCTTTTCAAGGTCAGCTGTTAATCATGAAAGTGGTGCAAAATCTGGAGTATCTGGGATTGTTTCAGGAATTATAATGACCTGTGCTCTTTTGTTTCTAACGCCTTTATTTGAGTACATACCTCAGTGTACTCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTATGATGAGGCCATTTTTTTGTGGCGTGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGTGCTACAACACTCTTTCTTGGGATTGAGATTGGTGTAATTGTTGGGGTTGGGGTTTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTGGGTCGTTTGCCAGGGACAACAGTTTATAGAAATGTTAAACAATATCCTGAAGCATATACATACAATGGAATTGTAATTGTTCGTGTTGATGCTCCTATTTATTTTGCAAACACAAGTTACATAAAGGACAGGTTACGGGAATTTGAAGTTGATGTTGATAGTTCTACAAGACGTGGACCTGAGGCCGAAAGAATTAATTTTGTGATTCTAGAGATGGCGCCTGTGACCTACATAGACTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGATTGCAATATCCAATCCAAGCCCCGAAGTTCTGCTAACCTTGTCTAGATCCGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAGCGTGTTCAAAGCTTGAAAGGGGGATCTAACATTTCACAAACACCACTCTCTTTATCTGAAGACAAATCAAGTTTCTTAGCCCGATTATTGAAAGAGAGAGGGGAGAACCTATCAATTACAGACTTGGAGTCTGGTATTGGCAGGTCTCCACTCTCCAGGGATAGAGATTCTCAACTGGAGCCATTGTTGTCAAAAGAACATTGA 2103 0.4413 MEITYASPSFSDLATVASASASMSSPATSTSRPVRVIPLQHPTITTSSSSSSLPNVAFSRFATRLRRMTWLEWIEFFLPCCRWIRIYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYAGFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLSSIADPSSELYTELAILLSLMVGILECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYDIDRSSKIIPLAKSIIAGADKFSWPPFVMGSVTLAILLVMKHLGKSRKHLRFLRASGPLTAVVLGTVFAKVGDIPQGLPKFSVPKAFEYAESLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSGIIMTCALLFLTPLFEYIPQCTLAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSATTLFLGIEIGVIVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRVDAPIYFANTSYIKDRLREFEVDVDSSTRRGPEAERINFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLTLSRSGLVELIGKEWYFVRVHDAVQVCLQRVQSLKGGSNISQTPLSLSEDKSSFLARLLKERGENLSITDLESGIGRSPLSRDRDSQLEPLLSKEH 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3399g00029 700 MobiDBLite consensus disorder prediction 681 700 - -
Gabi3399g00029 700 NCBIfam sulfate permease 79 627 IPR001902 GO:0016020|GO:0055085
Gabi3399g00029 700 FunFam Sulfate transporter 31 487 634 - -
Gabi3399g00029 700 Pfam STAS domain 508 627 IPR002645 -
Gabi3399g00029 700 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Gabi3399g00029 700 PANTHER SULFATE TRANSPORTER 58 634 IPR001902 GO:0016020|GO:0055085
Gabi3399g00029 700 CDD STAS_SulP_like_sulfate_transporter 508 624 - -
Gabi3399g00029 700 SUPERFAMILY SpoIIaa-like 509 631 IPR036513 -
Gabi3399g00029 700 ProSiteProfiles STAS domain profile. 507 631 IPR002645 -
Gabi3399g00029 700 Pfam Sulfate permease family 93 457 IPR011547 GO:0016020
Gabi3399g00029 700 Gene3D STAS domain 487 635 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3399g00029 Gabi-Chr3399 245660 256930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3399g00029 3 653 Inorganic Solute Cotransporters AT5G13550 71.880 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3399g00029 K18059 - gmx:100794754 1186.02