Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3399g00025 ATGGAGTCCAAACACCAAAGACCAAGTGTGATTTTAGAATTGATGGGTCTTGATAAAGTGCCTCCCCAACATCCTGTTAGAGCTAAACAGAAAGTGCTTTCTGAGAATTACCTGCAGAAAGTTGCCTCTATTGGTGTCAGAAAGAAGCGTTCATCCGATCAGCATCATTCCTTGGAAATGAGTACTGATGATATGGAAGAATCAGAGGATGTTTTAAAAGTGGTCAAAGCACTCAGGAGAGACAAGCACCATAATCCATCAAAGGAAAATGGGAAAGAGATCCCATATTTGTCTGGGGCAAAGGTAAAAGGTGTGCCACAACAGCTTTTGGATGCTTCAGTCAATTGGAAGCCTGAAAGTTTGGTTGATACCACTAGTTCATTCAATTTTGAAACAAGTGTGAATTCATGGAGGATAGCTGAGAAGGGAAATCTCCGACTGCGACAGAAAACAAATGATGGATTGCAAAAAGATATGAATGGAGAAGCTGGACTTTATGAAACATCTAGTCTTTCAAAATCTCAACTGGATCTGAAGGATGAAACTTTCACCTCAAGAGTTTCTCTTTTGAAACCAAATCCTGGAAAGGGAAGAAATGGTTTAAAATATTTTTCATTACCTAGTGCTTGCAAAAATTCTCGTTTGGCTGATGGGCCTCTCAAAGAGATATTTTGTCCTAGAAGCATAAAAGTATATCCTGAAATGAGAGGTAGAAAGAAAATATCCTATCACATGAATTTTGGTAAGAAGAATTCTAGATCTTTTAGTAAAATTTCAGAGGAAGTTTCTACACAAACAGGAAATGTTGCAAACAGAGTTTTAGAAAGTTCATTTTTCAGAGGGAATGAAGCATTTGTCAAAAGTTCTGATATGCTGAAGCCTGTTTCAAATATTACAGTTAATGAGATCCCACAAAAGTCCCAGTTCTTCTGTTCTGATGGTTCATATGTAGGCTTTGAAGCCATGAACAAAACTTTGGAGCAGAGGGATGTGACTGAAAAATTGCTAGAAGTCGGACAGCATGGTCACGGCAGTACCCATCACCAGTCACCTATGATTTCTGAACATGGAAATAGAGCAAGAAATTTGAGTTATCTAAATGGTTTTGGCAATGATAAAATTAAAAGGAACAATAGATGTAAGGTTGGTGTGAGTTATAGCTTTGCCAGAAAAGTGCAGATGGCCAGACCTCTTAGTGCAGCTTCTGTTATTGGTAATAATTGCGGAACTATGACTAAGGATGACTTGTTTCAGAAATATTGGGGTGTGAGGAAGAATGCATCTGCAAACTGGTCAATCCGGAAGCCAAAGAATCAAAGTATTAACCAGAAATATTGTTCTGAAGATGTGAACCTCAGGTCCAGCCATGAGAAATCCTCTTCTTTTTCCTCTTATTTCAATAGCAATCATACTGAAGAAAATTATATTGACCTCAGTAAGTTGAAGAAGAGATGTAATGGGAATGATTTGTCTGATAAGAAACCCATGCTTCCTCAATTGTCAAGATCAGGTCCTTCACACAGTCAGATCTTGCAAGAGACATGTTTAATGAACAATGACGTGAAGAATAATATGCATGAAGACAGTACTATGTTATTGCAAAATGTTGTGTCTCCTGATTTATCAATTGATTGCTTGGTGTCTGATGCAAAGACTGAGGTTGTTGGCTGGTCACATAATAATCCAACCATGCAGCAATCTGAATCAACAGCCTCCGTTGTGTCACATGCAGACAGTGATTCTTTGAGTCATACTTCACATGTTTCAACGCAACAGGATACATCAGAATTTCAAGAACATTCTGTTTATTCACTTTGTTTTGGGGCTGGCCCAGATTCCCTTGTTAGCTTCGAGCCAAGTCCAATTTCAGTTTTGGATCCCTCATTCAGGGAAGGCATTTCATTTAGCTCTGAATGTGGCTCTGGTGTATATGATTCCTCTGAAGTGGATGATGAAGGATTTGGTTTGAATGTTTCAAGTGATGAAGATTGTGGGAATGAATCTGTAGTGGGTGACATTGAAAAGAAGAAAGAGATAGTAGGATTATTTGGAGCTGAAGAAAGCAGGGATTTCTCCTATGTTGTTGAGGTCTTAACTGAGGCTGGTATATCTAATAGGAGCTTGTTTACAGACTTTTCCACATGGCACTCAGCAGAATGTCCTATTAGCCCTTCTGTCTTTGAAATCCTGGAAAAGAAATTTGGTGGCGCGCAGCAACTTTGGAAGAGATCCGAAAGGCGGCTTCTATTTGATCGCATTAATCTAGGGTTGTTAGAGATTTTTCAGCCATATTTGTACATTCCATTGTGGGAAAAGCCTGTTTCAAGAAGGTTGAGTGCTGAACCAAGCCAAGACTTGATTGAGGAGGAGATGTGGGGGTTGCTTGTTTCCCAAGAAAAGAAAGCTAGTAAGGAGAATGAAAACAATATGCTTGGTGGGGAAATTAGGTGGATAGAACTAGCTGATGATGTTGAAGATATTGTTAGAGAGATAGTTATATTGTTAATAGAGGAGCTTGCAAACGAGATAGTTTAG 2535 0.3893 MESKHQRPSVILELMGLDKVPPQHPVRAKQKVLSENYLQKVASIGVRKKRSSDQHHSLEMSTDDMEESEDVLKVVKALRRDKHHNPSKENGKEIPYLSGAKVKGVPQQLLDASVNWKPESLVDTTSSFNFETSVNSWRIAEKGNLRLRQKTNDGLQKDMNGEAGLYETSSLSKSQLDLKDETFTSRVSLLKPNPGKGRNGLKYFSLPSACKNSRLADGPLKEIFCPRSIKVYPEMRGRKKISYHMNFGKKNSRSFSKISEEVSTQTGNVANRVLESSFFRGNEAFVKSSDMLKPVSNITVNEIPQKSQFFCSDGSYVGFEAMNKTLEQRDVTEKLLEVGQHGHGSTHHQSPMISEHGNRARNLSYLNGFGNDKIKRNNRCKVGVSYSFARKVQMARPLSAASVIGNNCGTMTKDDLFQKYWGVRKNASANWSIRKPKNQSINQKYCSEDVNLRSSHEKSSSFSSYFNSNHTEENYIDLSKLKKRCNGNDLSDKKPMLPQLSRSGPSHSQILQETCLMNNDVKNNMHEDSTMLLQNVVSPDLSIDCLVSDAKTEVVGWSHNNPTMQQSESTASVVSHADSDSLSHTSHVSTQQDTSEFQEHSVYSLCFGAGPDSLVSFEPSPISVLDPSFREGISFSSECGSGVYDSSEVDDEGFGLNVSSDEDCGNESVVGDIEKKKEIVGLFGAEESRDFSYVVEVLTEAGISNRSLFTDFSTWHSAECPISPSVFEILEKKFGGAQQLWKRSERRLLFDRINLGLLEIFQPYLYIPLWEKPVSRRLSAEPSQDLIEEEMWGLLVSQEKKASKENENNMLGGEIRWIELADDVEDIVREIVILLIEELANEIV 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3399g00025 844 MobiDBLite consensus disorder prediction 562 595 - -
Gabi3399g00025 844 Pfam Domain of unknown function (DUF4378) 690 842 IPR025486 -
Gabi3399g00025 844 PANTHER AFADIN 1 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3399g00025 Gabi-Chr3399 210230 216523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3399g00025 618 844 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 32.661 2.16e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3399g00025 - - lang:109354222 921.768