Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3398g00053 ATGGCCTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGACATTGCTGAAAAAAAGATGGAAGGTAAGGATTTCACAGTGGCTCGTAAATTTGCCCTTAAAGCTCAGCAGCTATGTCCTGATCTGGAGAATATCACTCAAATGCTTATTGTTTGTGATGTGCATTGCTCTGCCGAGCAGAGATTATTTGGTAATGAGATGGACTGGTATAAAATTCTTCAAATTGAGCTGACGGCCAATGATGCAACAATTAAGAAGCAATACAGGAAGTTTGCACTCCAACTTCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTTTTGGATAGAGAAAAACGGTATCTGCTTGACATGAACTTGAAGCGCAGGGTTCCAATGAGCAAAACTGCTATGCCATTTCATCATCATCAGAAGGTTCAGACGAATTTTAATTCTGCGATGCAAACCAATGTCAGGCCCATTTTTGAAAACGTGAATCTTCAACAACAGTCTAGGCAGCCATTTCAGCAGGGGCTTAATAATGGTGGCCGTCCTACTTTTTGGACTGTCTGCTCATTTTGTTCTGTTAAATATGAGTATTACAGGGAAGTTTTAAATAGATCTCTTCGCTGCCAACATTGCAATAGGCCTTTCATTGCATATGATGTGAATATGCAAGATACAACATCGGCAGCTAATTCAAGTCAGCAAGCTTTTAGCCAGCAGAACTATAGTCATCATGGTGCTTCCAAGGTAGGTGTTGGATCTCAAGGTAATTTGCGTACTAACAGGTCCAATACAGAATCTCGTCAGCAGAAAGGTCCTACTTCTGATGTCCCTGTAAAGCGAAATGGTAGGAGGAGGAAATGGGTAGCAGAATCCAGTGAAAGTTCTGATTCTATAGTTAGCTCTGATTCCATAGATGATAAGTTTGCTGGCAATGATGGTTTTCCTGGTGTTTCTACTCATAGAGAAGAGCCTCCACGTAGATCTACGCGGCAAAAGCATCAGGTTTCCTACAAGGAGAATGCGAGTGATGATGATGACTTAGTACAACAGGTAAAAAGGGATAAGCGGAGTGGATCGCCAAGCGGTGGTGGTGAAAATCACGGGGAGGCAGCTAAAATGAAAAACCAGAGTGATGTGGCTGCTGATCTGAAAGATGATCAGAAAGAGGTAAAGCGGAAGAACTTTTATTCTGAAGAGAGCTTAGAAAATATAAATGACGAAATTAAGGTGAGGGGAAAAGAAGCATTGGGCAGCTCAAAGACAGATGAAGCTTCAGAGCATTCAACCTTGAAATCAACAAATCATCCAGATTTTTTTGTTTATCCTGATGCAGATTTCAGTGACTTTGACAAGGACAAGAAAGAGGAGTGTTTTGTGGCTGGTCAGATTTGGGCTGTTTATGATACAACAGATGGCATGCCTAGATTCTATGCTTTAATCAGAAAAGTTCTCTCTCCTGGATTCAAGCTGCGGATAACATGGTTTGAACCAAATCCAGATGACAAGGATGAAATCAACTGGTTAACTGCGCAATTGCCAATTGCTTGTGGGAAATATGAACTTGGTGCTACTGAAATCACTGAAGATCGTCTGATGTTCTCTCATCTGATTATTTGTGAAAAGATTGCCCGCAATACCTTTAAAGTGTATCCTAGAAAGGGAGAAATTTGGGCTCTTTTCAAAAATTGGGATATCAAATGGTATATGGATGCGGAATCTCATCGGCAGTATGATTTTGAGTTTGTTGAAATCATGTCAGATTATGTTGAAGGCGTGGGAGTAGTTGTTGCATACTTGGATAAGTTGAAAGGTTTTGTGAGCATCTTCTCTCAAATTACAAAGGGAGGTAATCGCACCTTTCAAATTCCATCAGTTGAGTTATTCAGATTCTCTCACAGAGTTCCATCTTTTAAAATGACTGGTCAGGAAAGGGTAGGTGTTCCTGTAGGATCTTATGAACTTGATCCTGTATCCTTGCCTATGAATCTGGAAGAGATTGCTGTTCCTGAAGATTTGGAAGGGAAGGTTGGTCTTGGTCCATCTGTTGGTATGAGCACAAGGTCCTCTGAGACATTGAAATTCGTGATGAAGCCTGAGGGAGATGCATCTATTGCCAAGGTTAATTTGGAAAGAAGCAATTCAGCAGAGGAGAACAAGGATCCTGTTGATCATATTGATGATGTTAATGCTCCTTCGGCTTCGGGCACAGAAGCTATTGAAATTCCAGACCCTCAGTTCTTCAATTTTGATGCTGCGAAATCCCTTGAAAAGTTTCAGATTGGTCAGATTTGGGCATTTTATGGTGATGAGGATGGACTGCCGAAATACTATGGTCAGATTGAGGAGGTTAGGACTAGCCCAGATTTTCAGTTGCAAGTTACTTATCTTACTAATTGCTGGCTACCAGATAATGCTATTAGATGGGAAGATAAGGACATGCTTATATCCTGTGGAAGATTTAAAATTAAAACAGATAGTTCCCCCTGTTTATATAGTAACACCTATTCTATTTCACATCAGTTGCATGCTAGTGTTAATGGCAAGACTAAGGAATATGCAATATTTCCAAGGAAAGGTGAAATTTGGGCATTATATAGGAAATGGACGCCTAAAATCAAACGTTCTGATATGGAAAACTTGGAGTATGACATAGTGGAAGTTGTTGGAGAAAATGATAAGTGGATGTATGTTTTACTTTTGGAGTTGGTAAGTGGTTTTAATTCAGTTTTTAAGAGCAAATCAAATGAGGGATCGGACATGACCATGAGAATATCTAGGAAGGAGTTGCTCAGGTTCTCCCACCAAATCCCAGCCTTCAAACTTACAGAAGAACATGGCAATCTGAGTGGCTTCTGGGAACTTGATCCTGGAGCACTACCAATGCATTATTTTAACTACAAATGA 2925 0.4058 MACNKEEALRAKDIAEKKMEGKDFTVARKFALKAQQLCPDLENITQMLIVCDVHCSAEQRLFGNEMDWYKILQIELTANDATIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRYLLDMNLKRRVPMSKTAMPFHHHQKVQTNFNSAMQTNVRPIFENVNLQQQSRQPFQQGLNNGGRPTFWTVCSFCSVKYEYYREVLNRSLRCQHCNRPFIAYDVNMQDTTSAANSSQQAFSQQNYSHHGASKVGVGSQGNLRTNRSNTESRQQKGPTSDVPVKRNGRRRKWVAESSESSDSIVSSDSIDDKFAGNDGFPGVSTHREEPPRRSTRQKHQVSYKENASDDDDLVQQVKRDKRSGSPSGGGENHGEAAKMKNQSDVAADLKDDQKEVKRKNFYSEESLENINDEIKVRGKEALGSSKTDEASEHSTLKSTNHPDFFVYPDADFSDFDKDKKEECFVAGQIWAVYDTTDGMPRFYALIRKVLSPGFKLRITWFEPNPDDKDEINWLTAQLPIACGKYELGATEITEDRLMFSHLIICEKIARNTFKVYPRKGEIWALFKNWDIKWYMDAESHRQYDFEFVEIMSDYVEGVGVVVAYLDKLKGFVSIFSQITKGGNRTFQIPSVELFRFSHRVPSFKMTGQERVGVPVGSYELDPVSLPMNLEEIAVPEDLEGKVGLGPSVGMSTRSSETLKFVMKPEGDASIAKVNLERSNSAEENKDPVDHIDDVNAPSASGTEAIEIPDPQFFNFDAAKSLEKFQIGQIWAFYGDEDGLPKYYGQIEEVRTSPDFQLQVTYLTNCWLPDNAIRWEDKDMLISCGRFKIKTDSSPCLYSNTYSISHQLHASVNGKTKEYAIFPRKGEIWALYRKWTPKIKRSDMENLEYDIVEVVGENDKWMYVLLLELVSGFNSVFKSKSNEGSDMTMRISRKELLRFSHQIPAFKLTEEHGNLSGFWELDPGALPMHYFNYK 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3398g00053 974 MobiDBLite consensus disorder prediction 236 394 - -
Gabi3398g00053 974 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gabi3398g00053 974 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gabi3398g00053 974 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gabi3398g00053 974 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Gabi3398g00053 974 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 703 - -
Gabi3398g00053 974 SMART dnaj_3 66 123 IPR001623 -
Gabi3398g00053 974 Pfam DnaJ domain 67 126 IPR001623 -
Gabi3398g00053 974 CDD DnaJ 67 120 IPR001623 -
Gabi3398g00053 974 MobiDBLite consensus disorder prediction 326 360 - -
Gabi3398g00053 974 MobiDBLite consensus disorder prediction 236 282 - -
Gabi3398g00053 974 MobiDBLite consensus disorder prediction 284 298 - -
Gabi3398g00053 974 Pfam Domain of unknown function (DUF3444) 744 951 IPR024593 -
Gabi3398g00053 974 Pfam Domain of unknown function (DUF3444) 445 650 IPR024593 -
Gabi3398g00053 974 Gene3D DnaJ domain 64 179 IPR036869 -
Gabi3398g00053 974 Coils Coil 380 400 - -
Gabi3398g00053 974 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3398g00053 Gabi-Chr3398 471968 480541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3398g00053 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.371 6.43e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3398g00053 - - gmx:100779228 1409.82