Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3398g00016 ATGATTTCCAATGTTTCTTCTTCGATGAACGATGAGGGGAAGAACAGAGGAATAGCCACCGATAACCCTTACTATGGCACCTTTCAAGGCGTCGCCAATTACTATCCTACGGCGGCCCCACCAGCTCCCTACGGTGGCCCTCATGCTTATTACCAAGGACAAGGATACGTCGCCGTTCCAGTTTATGCCGTTGCTGAAGGAAGGCCCCTAAGAGAACACCGTCTTCCTTGCTGTGGACTTGGTCTGGGTTGGCTATTGTTTATAATTGGCTTCTTTCTTGGTGGCGTTCCCTGGTACATCGGAACATTCTTTCTATTATGCGTACGAATGGATTATCGTGAAAAGCCTGGATTAATTGCATGTACAGTTGCTTCCCTCATTGCTGTGGTTGCTCTTACCGCTGGTGTAACACGTCAAGATCTTGTGAAGTTGACATGA 438 0.4772 MISNVSSSMNDEGKNRGIATDNPYYGTFQGVANYYPTAAPPAPYGGPHAYYQGQGYVAVPVYAVAEGRPLREHRLPCCGLGLGWLLFIIGFFLGGVPWYIGTFFLLCVRMDYREKPGLIACTVASLIAVVALTAGVTRQDLVKLT 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3398g00016 145 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 12 139 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3398g00016 Gabi-Chr3398 199567 208890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3398g00016 9 137 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.333 2.94e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3398g00016 - - gmx:102662831 165.236