Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3398g00014 ATGAATATGACAACTCTCACATCAACAACCTCTTTCTCCATCACCCAGCTAACCCCATATCTCATATGCTTCATCCTCTTCCTCATACTACTAGAACAGATCTCATACCTCTCCAAGAAGCGTTTCATTCCAGGCCCATCCTTGGTGCTACCCTTCATAGGCAACGCAATCCCATTGGTGCGAAACCCAACAAAGTTCTGGGACCTTCAATCCTCACTGGCAAAGTCCACCAACCTTGGGTTATCCGCTAACTACATCATCGGCAACTTCATCGTCTTCATCAGAGACACCGAACTCTCCCACAAGGTCTTCTCCAATGTCAGGCCCGATGCCTTCCACCTCGTGGGCCACCCCTTTGGCAAGAAGCTCTTCGGCGACCACAATCTCATCTATATGATGGGTCAAGATCACAAGAATCTCCGCCGTCGGATCGCACCCAACTTCACCCCCAAGGCCCTCTCCACCTACACCTCGCTGCAGCAGATTATTATCCTCAATCACCTTAAGTCATGGGTTGATAAGGCCCACCATCCAATCCCACTCCGGGTCCCGGCCCGCGACATGAACCTCGAGACCTCCCAGACCGTCTTCGTGGGCCCATACCTTGGCCCAAAAGCCCGAGAGCGGTTCGAGCGAGATTACTTCCTCTTCAACGTTGGACTCATGAAGCTCCCCATTGACTTCCCCGGCACCGCCTTCCGAAACGCCAGGCTCGCCGTCGACCGCCTCGCCGCAACCCTAGCCACCTGCGCGGAGATGAGCAAGGCGAGGATGGAGAAGGGGGAAGAGCCTTCGTGCCTAATCGATTATTGGATGCAGGACACGCTCAGGGAGATCGAGGAGACGAAGCTCGCCGGAAAGCCAGCGCCGCCGTACTCCAGCGACGCCGAGATCGGTGGTTACCTCTTTGACTTCCTCTTTGCGGCTCAGGATGCGTCCACGTCGTCGCTGCTGTGGGCGGTGGCGCTGCTGGATGAGCATCCGGAGGTGCTGGCCAGGGTGAGGGAGGAGGTCGCCGGAATATGGTCGCCGGAGTCGGATGCGCTGATAACCACGGAGCAGCTAAGGGAGATGAGGTACACGCAGGCGGTGGCGCGTGAGGTACTGAGGTATCGGCCGCCGGCGACCCTGGTGCCGCACATCGCTGCGGAGAGGTTCCCGCTGACGGAGTCGTACACGATTCCGAAGGGAGCAATCGTGTTCCCGTCGGTGTTCGAGTCGTCGTTTCAGGGGTTCAACGAACCGGACCGGTTCGATCCTGGCCGGTTCTTGGAGGAGAGGCAAGAGGATCAAATATTTAAAAGAAACTTTCTGTCTTTCGGGGCTGGGCCCCACCAATGTGTGGGCCAGAGGTACGCTTTGAATCACCTTGTTCTGTTCATTGCGATGTTCGCCACATTGATTGATTTCAAGAGGGACCGAACGGACGGCTGTGATGAAATCACTTATGTGCCTACGATTTGCCCCAAAGATGATTGCACGGTTTTTCTCTCTAAGCGGTGCACACGGTATCCTTCCTTCCCTACTGTGGAGGAGCTCGTCAAGTGA 1548 0.5594 MNMTTLTSTTSFSITQLTPYLICFILFLILLEQISYLSKKRFIPGPSLVLPFIGNAIPLVRNPTKFWDLQSSLAKSTNLGLSANYIIGNFIVFIRDTELSHKVFSNVRPDAFHLVGHPFGKKLFGDHNLIYMMGQDHKNLRRRIAPNFTPKALSTYTSLQQIIILNHLKSWVDKAHHPIPLRVPARDMNLETSQTVFVGPYLGPKARERFERDYFLFNVGLMKLPIDFPGTAFRNARLAVDRLAATLATCAEMSKARMEKGEEPSCLIDYWMQDTLREIEETKLAGKPAPPYSSDAEIGGYLFDFLFAAQDASTSSLLWAVALLDEHPEVLARVREEVAGIWSPESDALITTEQLREMRYTQAVAREVLRYRPPATLVPHIAAERFPLTESYTIPKGAIVFPSVFESSFQGFNEPDRFDPGRFLEERQEDQIFKRNFLSFGAGPHQCVGQRYALNHLVLFIAMFATLIDFKRDRTDGCDEITYVPTICPKDDCTVFLSKRCTRYPSFPTVEELVK 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3398g00014 515 CDD CYP61_CYP710 80 493 - -
Gabi3398g00014 515 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 PANTHER CYTOCHROME P450 26 42 464 - -
Gabi3398g00014 515 FunFam Cytochrome P450 61 33 500 - -
Gabi3398g00014 515 Gene3D Cytochrome P450 33 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Gabi3398g00014 515 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3398g00014 515 Pfam Cytochrome P450 44 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3398g00014 Gabi-Chr3398 184976 187631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3398g00014 17 507 Cytochrome P450 AT2G34500 70.243 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3398g00014 K09832 - gmx:100808148 875.93