Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3396g00003 ATGGCAGAGGAGAAAGGTAGAGTTTGTGTAACTGGAGGTACAGGATTTCTTGGTTCATGGATAATCAAGAGACTCCTTGAGGATGGATACGCTGTTAATACCACTATTAGATCTGATCCAGAACGTAAGAGAGATGTTAGCTTCCTCACAAATCTACCAGGTGCCTCTCAAAAGCTTCAAATATTCAACGCTGATCTCAGCAACCCAGAAAGTTTCAGTTCAGCAATTGAAGGGTGTGTTGGGATATTCCATACTGCTTCTCCAATTGATTTTGCAGTTAGTGAACCTGAGGAAATAGTGACCAAAAGAACCATTGATGGGGCATTAGGCATTTTAAAAGCATGCCTAAATTCAAAGACAGTTAAGAGAGTTGTTTACACTTCTAGTGCCTCTGCTGTTTGCTGGAATGGCAAAGAAGAAGAAGTATTGGATGAGAGTAGTTGGAGTGATGTAGATATGCTTAGAAGTGTGAAACCATTTGGTTGGTCATATGCAGTTTCCAAGACCTTGGCAGAGAAAGCTGTTCTTGAATTTGGAGAAAAACATGGGTTGGATGTTGTGACTCTAATACCCCCTTTTGTTGTTGGACCCTTCATTTGCCCTAAGCTTCCTGACTCAGTTGAGAAAGCATTGGTTTTGGTATTAGGCAAAAAGGATCAAATTGGTGTCACCCGTTTCCATATGGTACATGGGGATGATGTGGCTAGAGCACATATATTCCTACTTGAGCATCCTAATCCCAAAGGGAGATATAATTGTTCACCATTCATTGTACCTATTGAAGAGATATCTGAACTTCTTTCAGCCAAATACCCAGAATTTCAGATACCAACAGCAGATGAGCTGAAGGAAATTAAAGGTGTCAAGTTACCACATTTAAACTCGAAGAAACTGGTGGATGCTGGATTTGAGTTCAAGTATAGCATTGAGGAAATGTTCGACGATGCAATTCAATCCTGCAAGGAAAAGGGTTATCTTTAA 981 0.4037 MAEEKGRVCVTGGTGFLGSWIIKRLLEDGYAVNTTIRSDPERKRDVSFLTNLPGASQKLQIFNADLSNPESFSSAIEGCVGIFHTASPIDFAVSEPEEIVTKRTIDGALGILKACLNSKTVKRVVYTSSASAVCWNGKEEEVLDESSWSDVDMLRSVKPFGWSYAVSKTLAEKAVLEFGEKHGLDVVTLIPPFVVGPFICPKLPDSVEKALVLVLGKKDQIGVTRFHMVHGDDVARAHIFLLEHPNPKGRYNCSPFIVPIEEISELLSAKYPEFQIPTADELKEIKGVKLPHLNSKKLVDAGFEFKYSIEEMFDDAIQSCKEKGYL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3396g00003 326 FunFam Dihydroflavonol 4-reductase family 6 326 - -
Gabi3396g00003 326 CDD FR_SDR_e 8 303 - -
Gabi3396g00003 326 Pfam NAD dependent epimerase/dehydratase family 8 252 IPR001509 -
Gabi3396g00003 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 321 IPR036291 -
Gabi3396g00003 326 Gene3D - 5 326 - -
Gabi3396g00003 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3396g00003 Gabi-Chr3396 43573 45439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3396g00003 1 326 Monolignol Biosynthesis Gene Families AT2G02400 38.485 1.97e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3396g00003 - K13265 ag:AAB41550 565.459