Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3379g00012 ATGGCATCCAGTAGGAGTCAAGGTGGAATTCAGCAGTTGTTGGCTGCTGAACAAGAAGCCCAACGGATTGTCAATGCTGCGAAAAATGAAAAATTGGCTAGGTTGAAACAAGCCAAAGAAGAGGCCGAAAAGGAGATTGCTGAATACCGTGCTCAGCTAGAGTATGAGTTTCAAAAGAAGGTGTCAGATACTAGTGGAGATTCTGGAGCTAATGTCAAGCGGCTTGAGCAAGAGACTGAAGCAAAAATCCATCACCTGAAAAAGGATTCTGCAAGAATATCAGATGATGTTGTAACCATGCTCCTCAAGTATGTAACTAGTGTGAAAAATTAG 333 0.4234 MASSRSQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEAEKEIAEYRAQLEYEFQKKVSDTSGDSGANVKRLEQETEAKIHHLKKDSARISDDVVTMLLKYVTSVKN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3379g00012 110 Gene3D - 1 110 - -
Gabi3379g00012 110 FunFam V-type proton ATPase subunit G 3 110 - -
Gabi3379g00012 110 NCBIfam V-type ATPase subunit G 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gabi3379g00012 110 Coils Coil 10 59 - -
Gabi3379g00012 110 Pfam Vacuolar (H+)-ATPase G subunit 6 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gabi3379g00012 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3379g00012 Gabi-Chr3379 338653 340467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3379g00012 8 110 Primary Pumps ATPases(2) AT4G23710 67.961 2.96e-44 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3379g00012 K02152 - gmx:100306550 164.081