Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3374g00032 ATGTTCATTTGTCCAACTATTCAGTCCATGAAACTCATACCATTTTGGGGGCTTCTTGTAATGTGTTTTTGTGCAATGTTAATGGCCTTTTCTCCTGATGTTGTCGCTGCTTCAGCCACACTACATTCCAGAGAAGCAAATGCTTTGTTGAAATGGAAAGCCAGCCTTCACAACCAAAGCCAAGCTTTGCTATCTTCATGGACCGGAAATAGTCCTTGCAATAATTGGCTCGGAATTGAGTGTGACGTGTCCAGGTCTGTCTCCAGCATTAATCTTACAAATATTGGATTAAGAGGTATGCTTCGATGTCTCAACTTCACTTTACTTCCAAACATCCTCACTATAGATATAAGTCTCAACTCCTTGAATGGAAGTATTCCACCCCAAATTGGGGTATTGTCCAAACTCTCCTATCTTGATCTCAGTGACAATAATCTCTCTGGAACAATTCCTTCTGCTATTGGAAATTTGACAAAGGTCACTTGGTTAAATTTTTTCTCAAATGAACTTATTGGGTCAATACCATCCTCAATTGGTAACTTGATTAATTTGGAGACTGTTAGCTTTCACACAAACAAACTCTCAGGACCAATTCCTTCCACTATTGGTAACTTGGTTAACTTAGAATTAGTTGGACTTGCTGCAAACAAACTCTCTGGACCAATTCCTTCCACTATTGGAAATTTGACAAAACTTAGTGTGTTATATTTGTTCTCAAATGATCTCACTGGACCAATACCACACTCAATTGGTAATTTGGTTAATTTGGAGACAATTGACCTTTCTGAAAATAAACTCTCTAGACCAATTCCTTCCACTATTGGAAATTTGACAAAGGTCAGTGATTTAAATTTATTCTCAAATGACCTTACTGGGCCAATACCATCATCAATTGGTAACTTGATTAATTTGGAGATTGTTAGCTTTCACACAAACAAACTCTCAGGACCAATTCCTTCCACTATTGGTAACTTGTTTAATTTAGAAACAATTAAACTTGCTATAAACAAACTCTCTGGACCAATTCCTTTCATGATTGGAAATTTGACAAAAGTTAGTGTGTTATATTTATTCTCAAATGATCTCACTGGGCCAATACCACCGTCAATTGGTAATTTGGCTAATTTGGAATCAGTTGAACTTTTTGAAAATAAACTCTCAGGACCAATTCCTTCCACTATTGGAAATTTGACCAAGGTCAAGGTATTATATTTATACTCAAATGAACTCATTGGGCCAATACCACCATCAATTGGTAATTTGGCTGATTTGGAATCAGTTGATCTTGTTGACAACAAACTCTCGGGACCAATTCATTTCACTTTTGAAAATTTGACAAAGGTCAAAGTATTCTCCTTAGGCTCAAATGAACTCAGTGGGAACATCCCAATAGAAATGAACAGGCTCACTAATTTGGAAAAATTGCAGTTACATAATAATCATTTTATTGGTCATTTGCCTCATAACATTTGCGTTAGTGGAAAGTTGGCAAATTTTTCTGCTTTCAATAACCATTTTACTGGTTACGTTCCTAAGAGTTTGAAAAATTGCTCCAGCCTAATAAGAGTTCGACTTCAACAAAACCAGCTGACTGGAAATATAACAGATGATTTTGGCGTATATCCAAAATTGGACTACATCGAATTGAGTGACAATAATTTTTATGGTCACCTTTCACCAAATTGGGGAAAATGCTATAGCCTCACAAGCCTCAAGATCTCCAACAATAACTTATCTGGTGTCATACCACCAGAACTAGGCAAGGCAATCAACTTACATGTACTTGACTTATCTTCAAACCATCTCATGGGAAAAATTCCGAATGAGTTAGGTAAACTGACATCATTGATCAAACTCTTGATAAGCAACAATCATCTTTCACAAAATGTTCCCATGCAAATAACATCATTGCACGAACTTGATACCTTGGAGCTTGCAGGGAATAATTTATGTGGCTTCATCATAGAGCAACTTGGAATGCTGTCTAAGTTGTTGAACTTAAATTTGAGCCAAAATAATTTTAAGGGACATATTCCTGATGAGTTTAGGCAATTAAAAGTTCTTCGAAGTCTTGATCTTAGTGCAAATTTTTTGGGTGGAACAATACCAGCAGTGCTTGGACAACTGAAATACATAGAAATATTGAATCTCTCACACAATAGTCTTTCTGGTATAATTCCCACCAGCTTCGGTGACATGTTTAGCTTGACATCTGTTGATATATCATATAACCAATTAGAGGGTCCACTTCCAAACATCCCTGCCTTTCATAACGCTACAATTGAAGCTTTGAGAAATAATAGTGGCTTGTGTGGTAACATCTCTAGCTTGAAGCCTTGCCCTTCATCAAGTGGCATATCTCATCATAACACTAACAAAGTCATATGGGTAGTTCTACCCCTTACTTTGGGCATTCTATTGGTTGTAATATTTGTTATGGGAGTCTTGTATCATCTCTGCCGATCTTCAAGCACAAAAGAAAACCAAGCTGCAGAATCACAAGCTCAAAATCTATTTGCAATATGGAGTTTTGATGGAAAAATGGTGTATGAGAACATTATTGAAGCTACAGAAGAATTTGACAACAAACATCTTATTGGGGTTGGAGGGAATGCAAGTGTTTACAAAGCAGAGTTGCCCACTGGTCAAGTTGTTGCTGTGAAGAAACTCCATCCAGCACCAAATGAAGAAATATCCAATGTAAAAGCTTTCACAAGTGAGATCCAAGCTTTGACAGAAATTCGACATCGTAACATTGTCAAGCTATATGGGTTTTGTTCTCATTCACGATACTCATTTCTGGTTTATGAGTTCTTGGAGAAGGGTAGTGTGGAGATGACTTTGAAAAATGATGAACAAGCTATTGCATTTGATTGGAATAGGAGGGTGAATGTGGTTAAAGACGTAGCTAATGCTTTATGCTATATGCATCATGACTGCTTGCCTCCAATTGTTCATCGAGATATATCAAGCAAGAATGTTCTTTTGGATTTGGAATATGTGGCTCATGTCTCTGACTTCGGAACGGCTAAGCTCCTCAATCCTAATTCAACCAACTGGACCTCATTTGCAGGCACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAAGTAAATGAGAAATGTGATGTGTACAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAGCACCCTAGTGATGTCATGTCTTCTTCATGGATTGTTGTGGCCTCAAAAATTGATAATATATCGTTGATGGATAAGTTGGATCAACGTCTCCCTCATCCAGTGAATCCTATTGTGATAGATGTATTATCGATTGCAAGGATAGCAATTGGTTGCTTGAATGAAAGCCCACGCTCTCGCCCTACCATGGAGCAGGTTGTTAAGAAGCTTGTAATGTCAAAGTGA 3402 0.3745 MFICPTIQSMKLIPFWGLLVMCFCAMLMAFSPDVVAASATLHSREANALLKWKASLHNQSQALLSSWTGNSPCNNWLGIECDVSRSVSSINLTNIGLRGMLRCLNFTLLPNILTIDISLNSLNGSIPPQIGVLSKLSYLDLSDNNLSGTIPSAIGNLTKVTWLNFFSNELIGSIPSSIGNLINLETVSFHTNKLSGPIPSTIGNLVNLELVGLAANKLSGPIPSTIGNLTKLSVLYLFSNDLTGPIPHSIGNLVNLETIDLSENKLSRPIPSTIGNLTKVSDLNLFSNDLTGPIPSSIGNLINLEIVSFHTNKLSGPIPSTIGNLFNLETIKLAINKLSGPIPFMIGNLTKVSVLYLFSNDLTGPIPPSIGNLANLESVELFENKLSGPIPSTIGNLTKVKVLYLYSNELIGPIPPSIGNLADLESVDLVDNKLSGPIHFTFENLTKVKVFSLGSNELSGNIPIEMNRLTNLEKLQLHNNHFIGHLPHNICVSGKLANFSAFNNHFTGYVPKSLKNCSSLIRVRLQQNQLTGNITDDFGVYPKLDYIELSDNNFYGHLSPNWGKCYSLTSLKISNNNLSGVIPPELGKAINLHVLDLSSNHLMGKIPNELGKLTSLIKLLISNNHLSQNVPMQITSLHELDTLELAGNNLCGFIIEQLGMLSKLLNLNLSQNNFKGHIPDEFRQLKVLRSLDLSANFLGGTIPAVLGQLKYIEILNLSHNSLSGIIPTSFGDMFSLTSVDISYNQLEGPLPNIPAFHNATIEALRNNSGLCGNISSLKPCPSSSGISHHNTNKVIWVVLPLTLGILLVVIFVMGVLYHLCRSSSTKENQAAESQAQNLFAIWSFDGKMVYENIIEATEEFDNKHLIGVGGNASVYKAELPTGQVVAVKKLHPAPNEEISNVKAFTSEIQALTEIRHRNIVKLYGFCSHSRYSFLVYEFLEKGSVEMTLKNDEQAIAFDWNRRVNVVKDVANALCYMHHDCLPPIVHRDISSKNVLLDLEYVAHVSDFGTAKLLNPNSTNWTSFAGTFGYAAPELAYTMEVNEKCDVYSFGVLALEILFGKHPSDVMSSSWIVVASKIDNISLMDKLDQRLPHPVNPIVIDVLSIARIAIGCLNESPRSRPTMEQVVKKLVMSK 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3374g00032 1133 PANTHER LEUCINE RICH REPEAT KINASE 2 45 438 - -
Gabi3374g00032 1133 FunFam MDIS1-interacting receptor like kinase 2 939 1133 - -
Gabi3374g00032 1133 Pfam Leucine rich repeat 231 290 IPR001611 GO:0005515
Gabi3374g00032 1133 Pfam Leucine rich repeat 688 746 IPR001611 GO:0005515
Gabi3374g00032 1133 Gene3D Ribonuclease Inhibitor 42 199 IPR032675 -
Gabi3374g00032 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 285 495 - -
Gabi3374g00032 1133 SUPERFAMILY L domain-like 348 533 - -
Gabi3374g00032 1133 FunFam Leucine-rich repeat receptor protein kinase EMS1 200 284 - -
Gabi3374g00032 1133 Gene3D Transferase(Phosphotransferase) domain 1 939 1133 - -
Gabi3374g00032 1133 ProSiteProfiles Protein kinase domain profile. 860 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3374g00032 1133 Pfam Protein kinase domain 861 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3374g00032 1133 Gene3D Ribonuclease Inhibitor 273 363 IPR032675 -
Gabi3374g00032 1133 Gene3D Ribonuclease Inhibitor 364 466 IPR032675 -
Gabi3374g00032 1133 ProSitePatterns Tyrosine protein kinases specific active-site signature. 984 996 IPR008266 GO:0004672|GO:0006468
Gabi3374g00032 1133 SMART LRR_sd22_2 133 159 - -
Gabi3374g00032 1133 SMART LRR_sd22_2 397 423 - -
Gabi3374g00032 1133 SMART LRR_sd22_2 445 474 - -
Gabi3374g00032 1133 SMART LRR_sd22_2 685 719 - -
Gabi3374g00032 1133 SMART LRR_sd22_2 253 285 - -
Gabi3374g00032 1133 SMART LRR_sd22_2 349 375 - -
Gabi3374g00032 1133 PRINTS Leucine-rich repeat signature 253 266 - -
Gabi3374g00032 1133 PRINTS Leucine-rich repeat signature 136 149 - -
Gabi3374g00032 1133 FunFam Uncharacterized protein 496 790 - -
Gabi3374g00032 1133 Pfam Leucine Rich Repeat 591 613 IPR001611 GO:0005515
Gabi3374g00032 1133 Pfam Leucine Rich Repeat 135 157 IPR001611 GO:0005515
Gabi3374g00032 1133 Pfam Leucine rich repeat N-terminal domain 43 82 IPR013210 -
Gabi3374g00032 1133 SUPERFAMILY L domain-like 70 367 - -
Gabi3374g00032 1133 SMART LRR_typ_2 469 493 IPR003591 -
Gabi3374g00032 1133 SMART LRR_typ_2 253 277 IPR003591 -
Gabi3374g00032 1133 SMART LRR_typ_2 685 709 IPR003591 -
Gabi3374g00032 1133 SMART LRR_typ_2 397 421 IPR003591 -
Gabi3374g00032 1133 SMART LRR_typ_2 133 157 IPR003591 -
Gabi3374g00032 1133 SMART LRR_typ_2 613 637 IPR003591 -
Gabi3374g00032 1133 SMART LRR_typ_2 661 684 IPR003591 -
Gabi3374g00032 1133 SUPERFAMILY L domain-like 498 772 - -
Gabi3374g00032 1133 Gene3D Ribonuclease Inhibitor 467 788 IPR032675 -
Gabi3374g00032 1133 Gene3D Ribonuclease Inhibitor 200 272 IPR032675 -
Gabi3374g00032 1133 FunFam Nuclear pore complex protein NUP107 42 199 - -
Gabi3374g00032 1133 ProSitePatterns Protein kinases ATP-binding region signature. 866 889 IPR017441 GO:0005524
Gabi3374g00032 1133 SUPERFAMILY Protein kinase-like (PK-like) 844 1129 IPR011009 -
Gabi3374g00032 1133 FunFam Leucine-rich repeat receptor protein kinase MSP1 823 938 - -
Gabi3374g00032 1133 Gene3D Phosphorylase Kinase; domain 1 820 938 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3374g00032 Gabi-Chr3374 459701 463263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3374g00032 36 1032 Receptor kinase-like Gene Family AT4G08850 42.163 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gabi3374g00032 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3374g00032 - - gsj:114395001 1305.04