Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3373g00057 ATGAGTTTCAATTCAGTGCTGCATGGAACGACCTCAAATGAGCACAAGAAGTTTAAGGGAGTTCGGCGTCGAAAATGGGGCAAATGGGTATCGGAGATTCGTGTTCCTGGCACGCAAGAACGCCTCTGGTTGGGCACATACGCCACACCGGAGGCTGCGGCGGTGGCTCACGACGTAGCTGTGTATTGTCTGAGGAGTCCAGCTTCGACGACGTTGGACAAACTTAACTTCCCTGAGACTTTGTCTCATTACTGTGTTCAGCGGAAGGACATGTCTCCGAGGTCTGTTCAGAAGGTGGCTTCGGATGCTGGCATGGATGTTGATGCCCGCAACATTGCTGGCAAAACATCAACGGTGGCAGAGACTTCTGAGAATGAAAAGAAAAATGATGATGCTGATCGTTCTGATGTTGTGTTTGGGTGGGAAGGTTTGGGTGATGATTGTGGGACTTGGCAAGGAACTGAAGAATGTAGAGAAGGGGAGGCATTGAGCATTTCCATTGAAGATTATCTTTAG 516 0.4922 MSFNSVLHGTTSNEHKKFKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVAVYCLRSPASTTLDKLNFPETLSHYCVQRKDMSPRSVQKVASDAGMDVDARNIAGKTSTVAETSENEKKNDDADRSDVVFGWEGLGDDCGTWQGTEECREGEALSISIEDYL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3373g00057 171 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 130 - -
Gabi3373g00057 171 Pfam AP2 domain 17 65 IPR001471 GO:0003700|GO:0006355
Gabi3373g00057 171 SMART rav1_2 17 84 IPR001471 GO:0003700|GO:0006355
Gabi3373g00057 171 CDD AP2 16 80 IPR001471 GO:0003700|GO:0006355
Gabi3373g00057 171 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Gabi3373g00057 171 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Gabi3373g00057 171 ProSiteProfiles AP2/ERF domain profile. 17 78 IPR001471 GO:0003700|GO:0006355
Gabi3373g00057 171 SUPERFAMILY DNA-binding domain 17 78 IPR016177 GO:0003677
Gabi3373g00057 171 Gene3D AP2/ERF domain 16 80 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3373g00057 Gabi-Chr3373 519070 519585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3373g00057 10 109 AP2-EREBP Transcription Factor Family AT1G71520 59.000 3.28e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi3373g00057 AP2 1.8e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3373g00057 - - aprc:113869965 231.491