Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3373g00013 ATGGAGAGTAGTAACACCACCAACAAATCTAAAGAAATTGAACGAAGCTATGATACTTACCGAAGGAAGAGAAAGCGACCCATCATCAGATTATCCTCTTGTGAGGTGGCTGTGATACCCAACATAGAATCAAGCATCATCGGAGAAGATGAGTACTGTACCAAGACACTTTCCTCCGCATCACACGGTTTCATATCAGTGATAGGGCGGCGGAGAGTCATGGAAGACGCCGTGAAGGTGGTTACTGGTTTTGTGGCGGCTGAAAATTGTTCTGGCGGCGGCTACGATTTCTTCGCTGTTTATGACGGTCACGGTGGGACGATGGTGGCGAATGCTTGCCGTGACAGGTTGCACGTGTTGTTGGCAGATGAAGTGAAGGAGGAGGGATGGGAGAGTGGGTTGGATTGGCATAAGGTGATGTGTTCTTGTTTCATGAAGATGGATCAGGAAATTGGAGGTGGTGGTAATGATAAAGCGGGAATGAGCGGGAACACGATGGGTTCGACGGCGGCGGTGGTGGTGGTAGGGAAGGAGGAGATTGTGGTGGCGAATTGTGGAGACTCGAGAGCTGTATTGTGCCGTGGCGGTGTGGCCTTGCCACTTTCACGTGATCATAAGCCTGATCGTCCAGATGAAAAAGAGAGGATAGAAGCAGCAGGTGGAATAGTCATTGATTGGAACGGGAATCGTGTTTTAGGAGTACTTGCTACTTCCAGATCCATAGGGGATCACTGCATGAAACCTTTTGTGATATCTCAACCAGAGATCAATGTTTACGAACGAACAGAGTCAGATGAGTTTGTTGTAATAGCGAGTGACGGTCTGTGGGATGTAGTATCCAACAGTTTTGCTTGTGAGGTGGTAAGAAGTTGCCTCCATGGACAAATAAGGAGGAATTTAGATGATGAGGACTCAATTAAAAGTTATGCAACAGAGGCAGCAGCGTTGTTAGCAGAGTTGGCTATGGCTCGGGGAAGCAAAGACAACATCAGTGTTATAGTCATTCAGCTCAAGAGTTCAGCTTAA 1026 0.4747 MESSNTTNKSKEIERSYDTYRRKRKRPIIRLSSCEVAVIPNIESSIIGEDEYCTKTLSSASHGFISVIGRRRVMEDAVKVVTGFVAAENCSGGGYDFFAVYDGHGGTMVANACRDRLHVLLADEVKEEGWESGLDWHKVMCSCFMKMDQEIGGGGNDKAGMSGNTMGSTAAVVVVGKEEIVVANCGDSRAVLCRGGVALPLSRDHKPDRPDEKERIEAAGGIVIDWNGNRVLGVLATSRSIGDHCMKPFVISQPEINVYERTESDEFVVIASDGLWDVVSNSFACEVVRSCLHGQIRRNLDDEDSIKSYATEAAALLAELAMARGSKDNISVIVIQLKSSA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3373g00013 341 PANTHER PROTEIN PHOSPHATASE 33 337 IPR015655 GO:0004722|GO:0006470
Gabi3373g00013 341 SMART PP2C_4 50 335 IPR001932 -
Gabi3373g00013 341 Pfam Protein phosphatase 2C 63 330 IPR001932 -
Gabi3373g00013 341 SUPERFAMILY PP2C-like 58 338 IPR036457 -
Gabi3373g00013 341 ProSitePatterns PPM-type phosphatase domain signature. 97 105 IPR000222 GO:0043169
Gabi3373g00013 341 FunFam Protein phosphatase 2C 51 54 341 - -
Gabi3373g00013 341 CDD PP2Cc 61 337 IPR001932 -
Gabi3373g00013 341 ProSiteProfiles PPM-type phosphatase domain profile. 61 337 IPR001932 -
Gabi3373g00013 341 Gene3D - 55 341 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3373g00013 Gabi-Chr3373 148827 150137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3373g00013 57 338 PP2C-type Phosphatase Gene Family AT2G29380 48.973 1.70e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3373g00013 K14497 - gmx:100813248 464.151