Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3373g00011 ATGGATAAGCACCCTCCACATAAGGCAAAGATCTCCACAATCACAAGTACAACCTCTGAAGAAGTGACCAGTACTGTGTGGCAATTCATAGACATGAGCGAGCAGGAGGAGGATCTCATTCGCAGGATGTACGGGCTAGTCGGGGATAGGTGGGATTTGATAGCTGGTCGCATTCCAGGTCGTAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACACGGCGATGGTTTTTCTCATGGAAGAAAGGAACGTAATGCCAAAGACTCGTGA 273 0.4689 MDKHPPHKAKISTITSTTSEEVTSTVWQFIDMSEQEEDLIRRMYGLVGDRWDLIAGRIPGRKAEEIERFWIMRHGDGFSHGRKERNAKDS 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3373g00011 90 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 31 72 - -
Gabi3373g00011 90 FunFam MYB-like transcription factor 31 73 - -
Gabi3373g00011 90 Gene3D - 33 73 - -
Gabi3373g00011 90 SUPERFAMILY Homeodomain-like 33 79 IPR009057 -
Gabi3373g00011 90 CDD SANT 32 70 IPR001005 -
Gabi3373g00011 90 SMART sant 28 76 IPR001005 -
Gabi3373g00011 90 Pfam Myb-like DNA-binding domain 33 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3373g00011 Gabi-Chr3373 103807 105721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3373g00011 32 70 MYB Transcription Factor Family AT5G52600 58.974 9.00e-12 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi3373g00011 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3373g00011 K09422 - qsa:O6P43_034328 122.094