Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3373g00009 ATGGAAAATAACAGGAGTTGGGAACAGAACGCACTCTTCAATGAGCTATTTCAGGGGATGGAGATTGCAAGAAAGTTGAAGGAAGACTTGACTTTACCCTCTTCGGCTGACACTAGGGACTTGCTTGTGCAGAGGATATTATCTTCTTATGACAAGGCTTTACTAATTCTAAGATGGAATGCATCAATTTCCAAGTCACAGACCATGCATCAAGCAACTAAAACTTTGTCACCAGAGTCCCCAGTATCTGCCAAAAGAAGTCCTCCAATGGAGGACATTGATGGGGGCCTAATGGACCATCAGGAGCTTAAACACGATTCAAAGAAAAGAAAGACGATGCCCAAATGGAAGGATCAGATTAGAGTGAAGTTCGAGAATGGCTTTGAATGGCCCCACGAAGATGGATTCAACTGGAGAAAATATGGACAGAAAGACATCCTTGGTGCCAAATATCCCAGAAGCTATTATAGGTGCACCTTCCGCAACACTAAGGGCTGCTGGGCCACGAAGCAAGTGCAGAGAACAGATGAAGACCCCACTATCTTTGACATCACTTACCGAGGAAGCCACACCTGTTCTCAGGGAACCAATGCGGTTCTGCCACCAAAGTCACCAGACATACAAGAGAAACCGCATGGTCATAAAAACGATGTTTGCCATGCGCAGCCATCACAAGAAAGCCTTACAAAGTTCAGAAACACCTTGACTGTTAATACGGTTAACCTGGGAAATGAAGAAACGGCACAACATTTCACTTCCACTTCGAATTCATTTGGATGCTTGACACAAGATAACCACACCTTATTTCCTTCGGTACTAGAGAATGATCCCTTCTTGAGCAGCCTTTCACAAACACACTTGTCTCCAAACACGCCAGAATCAAATTATTTTCTAACTCCGTCTTTCCTCATAGATGAGTTTGATGGGATCTGTAACAAGCCATGCCCAGATTCTGATATTACTGAGATCGTTACCGCCAACACATCAGCCACCAATTATTCAATTTTCGATTTCAATTTCTCACTCGATGTACCGGAAATTGATCCAGATTTCCCTTTCAATGCCTCGGGATTTTTCTCCTAA 1083 0.4349 MENNRSWEQNALFNELFQGMEIARKLKEDLTLPSSADTRDLLVQRILSSYDKALLILRWNASISKSQTMHQATKTLSPESPVSAKRSPPMEDIDGGLMDHQELKHDSKKRKTMPKWKDQIRVKFENGFEWPHEDGFNWRKYGQKDILGAKYPRSYYRCTFRNTKGCWATKQVQRTDEDPTIFDITYRGSHTCSQGTNAVLPPKSPDIQEKPHGHKNDVCHAQPSQESLTKFRNTLTVNTVNLGNEETAQHFTSTSNSFGCLTQDNHTLFPSVLENDPFLSSLSQTHLSPNTPESNYFLTPSFLIDEFDGICNKPCPDSDITEIVTANTSATNYSIFDFNFSLDVPEIDPDFPFNASGFFS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3373g00009 360 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3373g00009 360 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3373g00009 360 ProSiteProfiles WRKY domain profile. 133 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3373g00009 360 FunFam WRKY transcription factor 53 118 195 - -
Gabi3373g00009 360 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3373g00009 360 Gene3D WRKY domain 119 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3373g00009 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 267 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3373g00009 Gabi-Chr3373 89624 91159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3373g00009 7 352 WRKY Transcription Factor Family AT4G11070 34.582 1.09e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3373g00009 WRKY 1.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3373g00009 - - gmx:100815760 494.582